Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AF213884.3-201ENST00000563833 479 ntBASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 MIR939-201ENST00000401314 82 ntBASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 AC110285.6-201ENST00000617652 491 ntBASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 FP475955.4-201ENST00000623131 1990 ntBASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 AC068880.1-201ENST00000507289 2297 ntBASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH3Q8TBE1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 KRT8P20-201ENST00000423953 1409 ntBASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH3Q8TBE1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CNIH3Q8TBE1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
CNIH3Q8TBE1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNIH3Q8TBE1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNIH3Q8TBE1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNIH3Q8TBE1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 PHGDH-210ENST00000641115 1638 ntBASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 CYP21A1P-202ENST00000354927 1481 ntBASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms