Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 UBE2SP1-201ENST00000450587 669 ntBASIC20.63■□□□□ 0.89
UBA3Q8TBC4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBA3Q8TBC4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 HTR7P1-201ENST00000538670 1336 ntBASIC20.62■□□□□ 0.89
UBA3Q8TBC4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.62■□□□□ 0.89
UBA3Q8TBC4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
UBA3Q8TBC4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 C1QL1P1-201ENST00000568105 661 ntBASIC20.6■□□□□ 0.89
UBA3Q8TBC4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
UBA3Q8TBC4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 LINC01465-201ENST00000408887 1940 ntBASIC20.59■□□□□ 0.89
UBA3Q8TBC4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms