Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 AC009237.14-201ENST00000609975 1594 ntBASIC17.28■□□□□ 0.36
LRRC28Q86X40 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 AIRN-201ENST00000601203 4374 ntBASIC17.28■□□□□ 0.36
LRRC28Q86X40 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC28Q86X40 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC28Q86X40 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC28Q86X40 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 AC133041.1-202ENST00000642053 222 ntBASIC17.27■□□□□ 0.36
LRRC28Q86X40 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
LRRC28Q86X40 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC28Q86X40 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC28Q86X40 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC28Q86X40 CROCCP3-202ENST00000420820 1947 ntBASIC17.27■□□□□ 0.35
LRRC28Q86X40 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LRRC28Q86X40 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC28Q86X40 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC28Q86X40 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LRRC28Q86X40 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC28Q86X40 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 BX276092.2-201ENST00000417668 665 ntBASIC17.26■□□□□ 0.35
LRRC28Q86X40 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRRC28Q86X40 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC28Q86X40 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms