Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-BQ31612 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-BQ31612 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-BQ31612 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-BQ31612 AC005332.1-201ENST00000577698 1310 ntBASIC18.94■□□□□ 0.62
HLA-BQ31612 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-BQ31612 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-BQ31612 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-BQ31612 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HLA-BQ31612 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-BQ31612 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-BQ31612 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-BQ31612 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.93■□□□□ 0.62
HLA-BQ31612 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-BQ31612 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-BQ31612 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HLA-BQ31612 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-BQ31612 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-BQ31612 TPM4P1-201ENST00000436100 807 ntBASIC18.93■□□□□ 0.62
HLA-BQ31612 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.93■□□□□ 0.62
HLA-BQ31612 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.93■□□□□ 0.62
HLA-BQ31612 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HLA-BQ31612 AC008622.2-201ENST00000617006 1229 ntBASIC18.93■□□□□ 0.62
HLA-BQ31612 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HLA-BQ31612 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-BQ31612 KRT8P45-201ENST00000414328 1447 ntBASIC18.92■□□□□ 0.62
HLA-BQ31612 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-BQ31612 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-BQ31612 KRT8P41-201ENST00000533985 1514 ntBASIC18.92■□□□□ 0.62
HLA-BQ31612 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 KRT18P38-201ENST00000449496 1282 ntBASIC18.92■□□□□ 0.62
HLA-BQ31612 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.92■□□□□ 0.62
HLA-BQ31612 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 AC116407.4-201ENST00000623319 1061 ntBASIC18.92■□□□□ 0.62
HLA-BQ31612 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
HLA-BQ31612 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-BQ31612 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-BQ31612 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-BQ31612 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-BQ31612 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-BQ31612 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
HLA-BQ31612 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-BQ31612 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-BQ31612 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-BQ31612 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-BQ31612 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HLA-BQ31612 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HLA-BQ31612 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-BQ31612 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-BQ31612 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
HLA-BQ31612 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-BQ31612 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-BQ31612 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-BQ31612 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-BQ31612 DUSP5P1-201ENST00000441325 1139 ntBASIC18.91■□□□□ 0.62
HLA-BQ31612 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-BQ31612 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.91■□□□□ 0.62
HLA-BQ31612 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-BQ31612 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-BQ31612 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-BQ31612 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-BQ31612 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-BQ31612 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-BQ31612 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-BQ31612 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-BQ31612 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-BQ31612 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HLA-BQ31612 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.9■□□□□ 0.62
HLA-BQ31612 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 HCG4P8-203ENST00000443049 980 ntBASIC18.9■□□□□ 0.62
HLA-BQ31612 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-BQ31612 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.9■□□□□ 0.62
HLA-BQ31612 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-BQ31612 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-BQ31612 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms