Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB5BP61020 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB5BP61020 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB5BP61020 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB5BP61020 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB5BP61020 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB5BP61020 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB5BP61020 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB5BP61020 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB5BP61020 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB5BP61020 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB5BP61020 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
RAB5BP61020 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB5BP61020 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB5BP61020 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB5BP61020 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RAB5BP61020 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB5BP61020 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB5BP61020 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB5BP61020 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB5BP61020 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB5BP61020 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB5BP61020 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB5BP61020 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAB5BP61020 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RAB5BP61020 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 AC068418.2-201ENST00000577309 3703 ntBASIC15.28■□□□□ 0.04
RAB5BP61020 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RAB5BP61020 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RAB5BP61020 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB5BP61020 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB5BP61020 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB5BP61020 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB5BP61020 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB5BP61020 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB5BP61020 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB5BP61020 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB5BP61020 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB5BP61020 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB5BP61020 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB5BP61020 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB5BP61020 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB5BP61020 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB5BP61020 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RAB5BP61020 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RAB5BP61020 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB5BP61020 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB5BP61020 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB5BP61020 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB5BP61020 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB5BP61020 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB5BP61020 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB5BP61020 CICP6-201ENST00000457191 2729 ntBASIC15.27■□□□□ 0.03
RAB5BP61020 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.27■□□□□ 0.03
RAB5BP61020 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
RAB5BP61020 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB5BP61020 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RAB5BP61020 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB5BP61020 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB5BP61020 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB5BP61020 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB5BP61020 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB5BP61020 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB5BP61020 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
RAB5BP61020 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RAB5BP61020 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB5BP61020 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms