Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3S2P59780 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3S2P59780 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.71■□□□□ 0.27
AP3S2P59780 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3S2P59780 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3S2P59780 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3S2P59780 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
AP3S2P59780 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
AP3S2P59780 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
AP3S2P59780 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.7■□□□□ 0.26
AP3S2P59780 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3S2P59780 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 AL031598.1-201ENST00000561511 1773 ntBASIC16.7■□□□□ 0.26
AP3S2P59780 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 AC093525.10-201ENST00000625130 1569 ntBASIC16.7■□□□□ 0.26
AP3S2P59780 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
AP3S2P59780 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.7■□□□□ 0.26
AP3S2P59780 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
AP3S2P59780 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.7■□□□□ 0.26
AP3S2P59780 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
AP3S2P59780 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3S2P59780 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
AP3S2P59780 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
AP3S2P59780 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3S2P59780 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.7■□□□□ 0.26
AP3S2P59780 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AP3S2P59780 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 KRT87P-202ENST00000534226 1464 ntBASIC16.69■□□□□ 0.26
AP3S2P59780 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3S2P59780 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3S2P59780 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3S2P59780 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3S2P59780 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
AP3S2P59780 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 KRT8P17-201ENST00000453110 1448 ntBASIC16.69■□□□□ 0.26
AP3S2P59780 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3S2P59780 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AP3S2P59780 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AP3S2P59780 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AP3S2P59780 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3S2P59780 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms