Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH8P55286 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDH8P55286 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CDH8P55286 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH8P55286 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDH8P55286 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH8P55286 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDH8P55286 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.81■□□□□ 0.92
CDH8P55286 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH8P55286 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDH8P55286 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH8P55286 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH8P55286 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
CDH8P55286 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CDH8P55286 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH8P55286 AP002982.1-201ENST00000492365 877 ntBASIC20.8■□□□□ 0.92
CDH8P55286 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH8P55286 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.8■□□□□ 0.92
CDH8P55286 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH8P55286 HLA-A-209ENST00000638375 975 ntBASIC20.8■□□□□ 0.92
CDH8P55286 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH8P55286 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH8P55286 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH8P55286 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH8P55286 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH8P55286 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDH8P55286 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH8P55286 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDH8P55286 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH8P55286 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH8P55286 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CDH8P55286 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH8P55286 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH8P55286 AC012618.2-201ENST00000428058 849 ntBASIC20.79■□□□□ 0.92
CDH8P55286 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH8P55286 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH8P55286 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.79■□□□□ 0.92
CDH8P55286 AC113410.3-201ENST00000623366 203 ntBASIC20.79■□□□□ 0.92
CDH8P55286 AL049637.2-201ENST00000641778 930 ntBASIC20.79■□□□□ 0.92
CDH8P55286 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH8P55286 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH8P55286 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH8P55286 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH8P55286 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH8P55286 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH8P55286 AL135905.2-201ENST00000584934 1404 ntBASIC20.78■□□□□ 0.92
CDH8P55286 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CDH8P55286 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDH8P55286 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDH8P55286 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH8P55286 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH8P55286 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH8P55286 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH8P55286 NIFKP9-201ENST00000419265 221 ntBASIC20.78■□□□□ 0.92
CDH8P55286 FAM197Y1-201ENST00000421178 764 ntBASIC20.78■□□□□ 0.92
CDH8P55286 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH8P55286 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.78■□□□□ 0.92
CDH8P55286 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH8P55286 AL353708.3-201ENST00000610272 989 ntBASIC20.78■□□□□ 0.92
CDH8P55286 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH8P55286 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH8P55286 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH8P55286 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH8P55286 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH8P55286 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH8P55286 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH8P55286 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH8P55286 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDH8P55286 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH8P55286 AL596275.1-201ENST00000423464 877 ntBASIC20.77■□□□□ 0.92
CDH8P55286 AL353807.1-201ENST00000427475 662 ntBASIC20.77■□□□□ 0.92
CDH8P55286 TSPY7P-201ENST00000431358 1114 ntBASIC20.77■□□□□ 0.92
CDH8P55286 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH8P55286 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH8P55286 CR392000.1-201ENST00000624770 1228 ntBASIC20.77■□□□□ 0.92
CDH8P55286 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH8P55286 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CDH8P55286 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH8P55286 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH8P55286 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.77■□□□□ 0.91
CDH8P55286 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDH8P55286 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH8P55286 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms