Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH4P55283 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH4P55283 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH4P55283 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.94■□□□□ 0.78
CDH4P55283 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.94■□□□□ 0.78
CDH4P55283 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH4P55283 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH4P55283 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH4P55283 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH4P55283 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.93■□□□□ 0.78
CDH4P55283 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.93■□□□□ 0.78
CDH4P55283 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH4P55283 AC026271.3-201ENST00000571884 352 ntBASIC19.93■□□□□ 0.78
CDH4P55283 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.93■□□□□ 0.78
CDH4P55283 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH4P55283 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH4P55283 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH4P55283 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH4P55283 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CDH4P55283 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH4P55283 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH4P55283 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH4P55283 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDH4P55283 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.92■□□□□ 0.78
CDH4P55283 AP003071.4-201ENST00000562276 1284 ntBASIC19.92■□□□□ 0.78
CDH4P55283 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH4P55283 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDH4P55283 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.92■□□□□ 0.78
CDH4P55283 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 AC125437.2-201ENST00000625180 2167 ntBASIC19.92■□□□□ 0.78
CDH4P55283 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH4P55283 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH4P55283 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH4P55283 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH4P55283 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDH4P55283 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDH4P55283 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH4P55283 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
CDH4P55283 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH4P55283 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDH4P55283 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 AC116562.2-201ENST00000507042 360 ntBASIC19.91■□□□□ 0.78
CDH4P55283 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.91■□□□□ 0.78
CDH4P55283 AL160286.2-201ENST00000567150 934 ntBASIC19.91■□□□□ 0.78
CDH4P55283 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH4P55283 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH4P55283 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH4P55283 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH4P55283 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH4P55283 TREX1-205ENST00000625293 1783 ntBASIC19.9■□□□□ 0.78
CDH4P55283 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH4P55283 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH4P55283 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CDH4P55283 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH4P55283 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH4P55283 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH4P55283 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.9■□□□□ 0.78
CDH4P55283 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH4P55283 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH4P55283 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH4P55283 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH4P55283 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH4P55283 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms