Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 CR392000.1-201ENST00000624770 1228 ntBASIC19.11■□□□□ 0.65
CLCNKAP51800 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCNKAP51800 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CLCNKAP51800 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLCNKAP51800 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCNKAP51800 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CLCNKAP51800 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCNKAP51800 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLCNKAP51800 AP003071.4-201ENST00000562276 1284 ntBASIC19.1■□□□□ 0.65
CLCNKAP51800 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCNKAP51800 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.1■□□□□ 0.65
CLCNKAP51800 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCNKAP51800 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCNKAP51800 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCNKAP51800 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CLCNKAP51800 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLCNKAP51800 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCNKAP51800 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLCNKAP51800 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLCNKAP51800 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCNKAP51800 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCNKAP51800 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCNKAP51800 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCNKAP51800 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCNKAP51800 AL031985.4-201ENST00000642138 673 ntBASIC19.09■□□□□ 0.65
CLCNKAP51800 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCNKAP51800 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CLCNKAP51800 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCNKAP51800 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCNKAP51800 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.08■□□□□ 0.65
CLCNKAP51800 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCNKAP51800 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCNKAP51800 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCNKAP51800 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCNKAP51800 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.08■□□□□ 0.65
CLCNKAP51800 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.08■□□□□ 0.65
CLCNKAP51800 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCNKAP51800 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCNKAP51800 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCNKAP51800 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.08■□□□□ 0.64
CLCNKAP51800 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CLCNKAP51800 AL355075.4-201ENST00000554988 638 ntBASIC19.08■□□□□ 0.64
CLCNKAP51800 AC073912.3-201ENST00000624414 853 ntBASIC19.08■□□□□ 0.64
CLCNKAP51800 HLA-A-209ENST00000638375 975 ntBASIC19.08■□□□□ 0.64
CLCNKAP51800 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCNKAP51800 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCNKAP51800 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCNKAP51800 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCNKAP51800 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCNKAP51800 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCNKAP51800 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCNKAP51800 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCNKAP51800 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CLCNKAP51800 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCNKAP51800 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
CLCNKAP51800 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.07■□□□□ 0.64
CLCNKAP51800 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.07■□□□□ 0.64
CLCNKAP51800 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.07■□□□□ 0.64
CLCNKAP51800 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CLCNKAP51800 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms