Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-1P43699 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-1P43699 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-1P43699 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-1P43699 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
NKX2-1P43699 KRT8P20-201ENST00000423953 1409 ntBASIC15.94■□□□□ 0.14
NKX2-1P43699 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NKX2-1P43699 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX2-1P43699 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NKX2-1P43699 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NKX2-1P43699 AL390961.4-201ENST00000623958 2535 ntBASIC15.93■□□□□ 0.14
NKX2-1P43699 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX2-1P43699 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NKX2-1P43699 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX2-1P43699 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX2-1P43699 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX2-1P43699 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX2-1P43699 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
NKX2-1P43699 AC005332.8-201ENST00000622750 2735 ntBASIC15.93■□□□□ 0.14
NKX2-1P43699 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NKX2-1P43699 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NKX2-1P43699 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-1P43699 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX2-1P43699 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX2-1P43699 AC006333.2-201ENST00000607957 2099 ntBASIC15.92■□□□□ 0.14
NKX2-1P43699 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.92■□□□□ 0.14
NKX2-1P43699 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-1P43699 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-1P43699 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.91■□□□□ 0.14
NKX2-1P43699 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.91■□□□□ 0.14
NKX2-1P43699 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NKX2-1P43699 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.91■□□□□ 0.14
NKX2-1P43699 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NKX2-1P43699 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NKX2-1P43699 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-1P43699 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.91■□□□□ 0.14
NKX2-1P43699 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms