Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MDH1P40925 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MDH1P40925 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MDH1P40925 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.55■□□□□ 0.72
MDH1P40925 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
MDH1P40925 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
MDH1P40925 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MDH1P40925 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 ABALON-201ENST00000629058 1903 ntBASIC19.55■□□□□ 0.72
MDH1P40925 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
MDH1P40925 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.55■□□□□ 0.72
MDH1P40925 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.55■□□□□ 0.72
MDH1P40925 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.55■□□□□ 0.72
MDH1P40925 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.55■□□□□ 0.72
MDH1P40925 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 AL358852.1-201ENST00000623174 1268 ntBASIC19.55■□□□□ 0.72
MDH1P40925 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MDH1P40925 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
MDH1P40925 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MDH1P40925 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MDH1P40925 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MDH1P40925 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.54■□□□□ 0.72
MDH1P40925 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.54■□□□□ 0.72
MDH1P40925 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
MDH1P40925 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.54■□□□□ 0.72
MDH1P40925 SLC7A5P2-201ENST00000553010 536 ntBASIC19.54■□□□□ 0.72
MDH1P40925 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
MDH1P40925 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
MDH1P40925 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.54■□□□□ 0.72
MDH1P40925 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.54■□□□□ 0.72
MDH1P40925 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 AC012313.1-201ENST00000593393 3059 ntBASIC19.54■□□□□ 0.72
MDH1P40925 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MDH1P40925 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.54■□□□□ 0.72
MDH1P40925 TSPY26P-201ENST00000476365 1326 ntBASIC19.53■□□□□ 0.72
MDH1P40925 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.53■□□□□ 0.72
MDH1P40925 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.53■□□□□ 0.72
MDH1P40925 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MDH1P40925 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MDH1P40925 PGM5P4-201ENST00000421970 445 ntBASIC19.53■□□□□ 0.72
MDH1P40925 AC010141.2-201ENST00000452426 721 ntBASIC19.53■□□□□ 0.72
MDH1P40925 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.53■□□□□ 0.72
MDH1P40925 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.53■□□□□ 0.72
MDH1P40925 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
MDH1P40925 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MDH1P40925 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MDH1P40925 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
MDH1P40925 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.53■□□□□ 0.72
MDH1P40925 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
MDH1P40925 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.52■□□□□ 0.72
MDH1P40925 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MDH1P40925 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.52■□□□□ 0.72
MDH1P40925 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.52■□□□□ 0.72
MDH1P40925 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MDH1P40925 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MDH1P40925 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
MDH1P40925 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
MDH1P40925 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MDH1P40925 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
MDH1P40925 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
MDH1P40925 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.52■□□□□ 0.71
MDH1P40925 PRORSD1P-202ENST00000563365 2154 ntBASIC19.51■□□□□ 0.71
MDH1P40925 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms