Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ISM2-201ENST00000216481 3045 ntTSL 213.09□□□□□ -0.313e-6■■■■□ 21.9
RPS3P23396 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.533e-6■■■■□ 21.9
RPS3P23396 GSN-201ENST00000373806 879 ntTSL 218.49■□□□□ 0.552e-10■■■■□ 21.9
RPS3P23396 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.96■■□□□ 1.118e-7■■■■□ 21.9
RPS3P23396 EML2-225ENST00000590819 626 ntTSL 316.21■□□□□ 0.192e-9■■■■□ 21.8
RPS3P23396 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.9■□□□□ 0.945e-9■■■■□ 21.8
RPS3P23396 RPS6-201ENST00000315377 863 ntTSL 3 BASIC11.46□□□□□ -0.575e-9■■■■□ 21.8
RPS3P23396 RPS6-202ENST00000380381 892 ntTSL 2 BASIC9.21□□□□□ -0.945e-9■■■■□ 21.8
RPS3P23396 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.025e-9■■■■□ 21.8
RPS3P23396 TECR-204ENST00000594545 735 ntTSL 319.82■□□□□ 0.763e-7■■■■□ 21.8
RPS3P23396 TECR-224ENST00000601461 828 ntTSL 310.53□□□□□ -0.723e-7■■■■□ 21.8
RPS3P23396 PPP2R1A-208ENST00000473820 646 ntTSL 29.6□□□□□ -0.874e-7■■■■□ 21.8
RPS3P23396 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.652e-7■■■■□ 21.8
RPS3P23396 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.03■□□□□ 0.322e-7■■■■□ 21.8
RPS3P23396 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.312e-7■■■■□ 21.8
RPS3P23396 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.19■□□□□ 0.182e-7■■■■□ 21.8
RPS3P23396 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.022e-7■■■■□ 21.8
RPS3P23396 WBP2-208ENST00000588373 1374 ntTSL 214.34□□□□□ -0.112e-7■■■■□ 21.8
RPS3P23396 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.3□□□□□ -0.122e-7■■■■□ 21.8
RPS3P23396 WBP2-216ENST00000591831 1406 ntTSL 513.76□□□□□ -0.212e-7■■■■□ 21.8
RPS3P23396 WBP2-207ENST00000587642 3718 ntTSL 28.89□□□□□ -0.992e-7■■■■□ 21.8
RPS3P23396 NME1-208ENST00000487481 987 ntTSL 214.22□□□□□ -0.131e-13■■■■□ 21.8
RPS3P23396 HYAL2-210ENST00000481597 1513 ntTSL 1 (best)13.48□□□□□ -0.251e-6■■■■□ 21.8
RPS3P23396 FBL-206ENST00000597224 732 ntTSL 38.33□□□□□ -1.083e-7■■■■□ 21.8
RPS3P23396 MGAT1-214ENST00000507384 572 ntTSL 420.79■□□□□ 0.925e-14■■■■□ 21.8
RPS3P23396 TMED9-206ENST00000513799 772 ntTSL 211.77□□□□□ -0.532e-11■■■■□ 21.8
RPS3P23396 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.591e-15■■■■□ 21.8
RPS3P23396 SPP1-211ENST00000614857 1558 ntTSL 2 BASIC10.05□□□□□ -0.81e-15■■■■□ 21.8
RPS3P23396 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.011e-15■■■■□ 21.8
RPS3P23396 SPP1-207ENST00000508233 825 ntTSL 27.72□□□□□ -1.171e-15■■■■□ 21.8
RPS3P23396 SPP1-209ENST00000509659 1664 ntTSL 1 (best)7.09□□□□□ -1.271e-15■■■■□ 21.8
RPS3P23396 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.33□□□□□ -1.41e-15■■■■□ 21.8
RPS3P23396 UQCRC2-207ENST00000565331 565 ntTSL 35.77□□□□□ -1.492e-8■■■■□ 21.8
RPS3P23396 LPCAT1-206ENST00000514484 756 ntTSL 318.31■□□□□ 0.523e-6■■■■□ 21.8
RPS3P23396 GAPDHP35-201ENST00000513369 976 ntBASIC8.68□□□□□ -1.023e-6■■■■□ 21.8
RPS3P23396 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.96■□□□□ 0.472e-7■■■■□ 21.8
RPS3P23396 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.272e-7■■■■□ 21.8
RPS3P23396 SDC2-207ENST00000522911 677 ntTSL 3 BASIC8.98□□□□□ -0.972e-7■■■■□ 21.8
RPS3P23396 UBL5-204ENST00000588595 546 ntTSL 220.61■□□□□ 0.894e-9■■■■□ 21.8
RPS3P23396 SERPINF1-212ENST00000577053 731 ntTSL 512.15□□□□□ -0.462e-22■■■■□ 21.8
RPS3P23396 NANS-203ENST00000427646 1378 ntTSL 211.15□□□□□ -0.637e-9■■■■□ 21.8
RPS3P23396 NANS-202ENST00000415280 715 ntTSL 59.34□□□□□ -0.917e-9■■■■□ 21.8
RPS3P23396 CES1-206ENST00000565403 540 ntTSL 517.46■□□□□ 0.394e-7■■■■□ 21.8
RPS3P23396 CES1-204ENST00000563005 1002 ntTSL 512.67□□□□□ -0.384e-7■■■■□ 21.8
RPS3P23396 NUCB1-203ENST00000411700 673 ntTSL 420.19■□□□□ 0.822e-7■■■■□ 21.8
RPS3P23396 NUCB1-206ENST00000451312 563 ntTSL 216.67■□□□□ 0.262e-7■■■■□ 21.8
RPS3P23396 NUCB1-205ENST00000443560 551 ntTSL 414.4□□□□□ -0.12e-7■■■■□ 21.8
RPS3P23396 NUCB1-209ENST00000465524 839 ntTSL 515.24■□□□□ 0.037e-8■■■■□ 21.8
RPS3P23396 SLC38A3-208ENST00000621456 635 ntTSL 517.03■□□□□ 0.321e-14■■■■□ 21.8
RPS3P23396 SLC38A3-207ENST00000620404 566 ntTSL 313.45□□□□□ -0.261e-14■■■■□ 21.8
RPS3P23396 SLC38A3-205ENST00000610458 584 ntTSL 312.6□□□□□ -0.391e-14■■■■□ 21.8
RPS3P23396 RETSAT-205ENST00000449375 1759 ntTSL 514.62□□□□□ -0.074e-7■■■■□ 21.8
RPS3P23396 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.854e-7■■■■□ 21.8
RPS3P23396 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC12.53□□□□□ -0.47e-7■■■■□ 21.8
RPS3P23396 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.937e-7■■■■□ 21.8
RPS3P23396 NDUFB8-205ENST00000466088 829 ntTSL 214.88□□□□□ -0.031e-8■■■■□ 21.8
RPS3P23396 NDUFB8-206ENST00000528425 608 ntTSL 414.8□□□□□ -0.041e-8■■■■□ 21.8
RPS3P23396 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.72□□□□□ -0.051e-8■■■■□ 21.8
RPS3P23396 PDHA1-207ENST00000423505 731 ntTSL 217.35■□□□□ 0.372e-10■■■■□ 21.8
RPS3P23396 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.67■□□□□ 0.262e-10■■■■□ 21.8
RPS3P23396 ANP32A-208ENST00000495420 707 ntTSL 216.3■□□□□ 0.26e-12■■■■□ 21.8
RPS3P23396 PDHA1-201ENST00000355808 699 ntTSL 314.64□□□□□ -0.072e-10■■■■□ 21.8
RPS3P23396 PLK1-208ENST00000568568 582 ntTSL 314.62□□□□□ -0.073e-6■■■■□ 21.8
RPS3P23396 RAVER1-203ENST00000591969 742 ntTSL 314.41□□□□□ -0.12e-10■■■■□ 21.8
RPS3P23396 PDHA1-211ENST00000492364 611 ntTSL 212.7□□□□□ -0.382e-10■■■■□ 21.8
RPS3P23396 ITM2B-203ENST00000463839 810 ntTSL 32.07□□□□□ -2.082e-10■■■■□ 21.8
RPS3P23396 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.188e-19■■■■□ 21.8
RPS3P23396 ID3-203ENST00000486541 892 ntTSL 1 (best)17.37■□□□□ 0.378e-8■■■■□ 21.8
RPS3P23396 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.128e-8■■■■□ 21.8
RPS3P23396 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.314e-10■■■■□ 21.7
RPS3P23396 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.024e-10■■■■□ 21.7
RPS3P23396 CTSC-207ENST00000533865 542 ntTSL 410.6□□□□□ -0.715e-9■■■■□ 21.7
RPS3P23396 CDK4-213ENST00000552713 685 ntTSL 27.92□□□□□ -1.143e-20■■■■□ 21.7
RPS3P23396 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.361e-7■■■■□ 21.7
RPS3P23396 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.681e-7■■■■□ 21.7
RPS3P23396 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.921e-7■■■■□ 21.7
RPS3P23396 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.031e-7■■■■□ 21.7
RPS3P23396 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.3□□□□□ -0.122e-16■■■■□ 21.7
RPS3P23396 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.188e-9■■■■□ 21.7
RPS3P23396 CLTC-207ENST00000483176 760 ntTSL 34.74□□□□□ -1.656e-13■■■■□ 21.7
RPS3P23396 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.65■■□□□ 1.544e-7■■■■□ 21.7
RPS3P23396 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.98■□□□□ 0.794e-7■■■■□ 21.7
RPS3P23396 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.664e-7■■■■□ 21.7
RPS3P23396 SAE1-207ENST00000596995 2106 ntTSL 218.86■□□□□ 0.614e-7■■■■□ 21.7
RPS3P23396 SAE1-204ENST00000414294 2211 ntTSL 218.68■□□□□ 0.584e-7■■■■□ 21.7
RPS3P23396 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.15■□□□□ 0.184e-7■■■■□ 21.7
RPS3P23396 VRK1-206ENST00000557222 1029 ntTSL 58.24□□□□□ -1.093e-9■■■■□ 21.7
RPS3P23396 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.461e-6■■■■□ 21.7
RPS3P23396 DBN1-206ENST00000472831 2667 ntTSL 216.2■□□□□ 0.181e-6■■■■□ 21.7
RPS3P23396 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.071e-6■■■■□ 21.7
RPS3P23396 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.211e-6■■■■□ 21.7
RPS3P23396 ALG3-204ENST00000423996 904 ntTSL 220.62■□□□□ 0.891e-8■■■■□ 21.7
RPS3P23396 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.41e-8■■■■□ 21.7
RPS3P23396 ALG3-202ENST00000411922 1452 ntTSL 1 (best)16.73■□□□□ 0.271e-8■■■■□ 21.7
RPS3P23396 ALG3-206ENST00000446569 967 ntTSL 516.53■□□□□ 0.241e-8■■■■□ 21.7
RPS3P23396 ALG3-203ENST00000414845 814 ntTSL 516.09■□□□□ 0.171e-8■■■■□ 21.7
RPS3P23396 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.93□□□□□ -0.021e-8■■■■□ 21.7
RPS3P23396 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.19□□□□□ -0.141e-8■■■■□ 21.7
RPS3P23396 CTSL-205ENST00000482054 908 ntTSL 212.28□□□□□ -0.441e-6■■■■□ 21.7
RPS3P23396 CTSL-202ENST00000342020 933 ntTSL 2 BASIC11.6□□□□□ -0.551e-6■■■■□ 21.7
Retrieved 100 of 24,271 protein–RNA pairs in 202.5 ms