Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.38■□□□□ 0.53
NCK1P16333 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.38■□□□□ 0.53
NCK1P16333 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.38■□□□□ 0.53
NCK1P16333 MFSD11-216ENST00000590393 1141 ntBASIC18.38■□□□□ 0.53
NCK1P16333 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.38■□□□□ 0.53
NCK1P16333 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NCK1P16333 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.38■□□□□ 0.53
NCK1P16333 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.38■□□□□ 0.53
NCK1P16333 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.38■□□□□ 0.53
NCK1P16333 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
NCK1P16333 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
NCK1P16333 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.37■□□□□ 0.53
NCK1P16333 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NCK1P16333 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NCK1P16333 AL162412.1-201ENST00000567129 965 ntBASIC18.37■□□□□ 0.53
NCK1P16333 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NCK1P16333 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NCK1P16333 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.37■□□□□ 0.53
NCK1P16333 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.37■□□□□ 0.53
NCK1P16333 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
NCK1P16333 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.37■□□□□ 0.53
NCK1P16333 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NCK1P16333 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCK1P16333 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCK1P16333 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NCK1P16333 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.36■□□□□ 0.53
NCK1P16333 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.36■□□□□ 0.53
NCK1P16333 RARRES2P4-201ENST00000514074 484 ntBASIC18.36■□□□□ 0.53
NCK1P16333 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.36■□□□□ 0.53
NCK1P16333 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.36■□□□□ 0.53
NCK1P16333 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCK1P16333 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.36■□□□□ 0.53
NCK1P16333 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.36■□□□□ 0.53
NCK1P16333 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.36■□□□□ 0.53
NCK1P16333 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCK1P16333 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.35■□□□□ 0.53
NCK1P16333 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.35■□□□□ 0.53
NCK1P16333 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NCK1P16333 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
NCK1P16333 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
NCK1P16333 KRT18P68-201ENST00000392293 1000 ntBASIC18.35■□□□□ 0.53
NCK1P16333 AC007322.4-201ENST00000509611 723 ntBASIC18.35■□□□□ 0.53
NCK1P16333 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NCK1P16333 AC013268.1-206ENST00000638368 961 ntBASIC18.35■□□□□ 0.53
NCK1P16333 AC112229.1-201ENST00000639295 961 ntBASIC18.35■□□□□ 0.53
NCK1P16333 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCK1P16333 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.35■□□□□ 0.53
NCK1P16333 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.35■□□□□ 0.53
NCK1P16333 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
NCK1P16333 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NCK1P16333 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NCK1P16333 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.35■□□□□ 0.53
NCK1P16333 AC141586.3-201ENST00000562166 1838 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms