Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HLA-DQB2P05538 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB2P05538 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HLA-DQB2P05538 RPPH1-201ENST00000516869 333 ntBASIC19.77■□□□□ 0.76
HLA-DQB2P05538 AC110285.5-201ENST00000611501 352 ntBASIC19.77■□□□□ 0.76
HLA-DQB2P05538 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DQB2P05538 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
HLA-DQB2P05538 ZNF815P-204ENST00000434898 1737 ntBASIC19.76■□□□□ 0.75
HLA-DQB2P05538 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 C1QL1P1-201ENST00000568105 661 ntBASIC19.76■□□□□ 0.75
HLA-DQB2P05538 AL359736.2-201ENST00000621992 437 ntBASIC19.76■□□□□ 0.75
HLA-DQB2P05538 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DQB2P05538 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 AC005332.7-201ENST00000614046 2005 ntBASIC19.75■□□□□ 0.75
HLA-DQB2P05538 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 KRT16P5-201ENST00000455284 522 ntBASIC19.75■□□□□ 0.75
HLA-DQB2P05538 AC098590.1-201ENST00000468126 897 ntBASIC19.75■□□□□ 0.75
HLA-DQB2P05538 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DQB2P05538 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB2P05538 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms