Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX6O95503 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX6O95503 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CBX6O95503 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX6O95503 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX6O95503 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX6O95503 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX6O95503 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.34■□□□□ 0.69
CBX6O95503 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CBX6O95503 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.34■□□□□ 0.69
CBX6O95503 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CBX6O95503 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CBX6O95503 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.34■□□□□ 0.69
CBX6O95503 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX6O95503 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX6O95503 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CBX6O95503 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.34■□□□□ 0.69
CBX6O95503 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX6O95503 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CBX6O95503 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.34■□□□□ 0.69
CBX6O95503 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CBX6O95503 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CBX6O95503 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX6O95503 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.33■□□□□ 0.69
CBX6O95503 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX6O95503 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX6O95503 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX6O95503 PCDHB18P-201ENST00000524813 2368 ntBASIC19.33■□□□□ 0.69
CBX6O95503 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX6O95503 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX6O95503 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX6O95503 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX6O95503 AC245052.3-201ENST00000450182 901 ntBASIC19.33■□□□□ 0.68
CBX6O95503 RNA5SP413-201ENST00000516373 109 ntBASIC19.33■□□□□ 0.68
CBX6O95503 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.33■□□□□ 0.68
CBX6O95503 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX6O95503 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX6O95503 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX6O95503 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX6O95503 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX6O95503 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CBX6O95503 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.33■□□□□ 0.68
CBX6O95503 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.33■□□□□ 0.68
CBX6O95503 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CBX6O95503 AL390961.4-201ENST00000623958 2535 ntBASIC19.32■□□□□ 0.68
CBX6O95503 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.32■□□□□ 0.68
CBX6O95503 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.32■□□□□ 0.68
CBX6O95503 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.32■□□□□ 0.68
CBX6O95503 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.32■□□□□ 0.68
CBX6O95503 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CBX6O95503 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.32■□□□□ 0.68
CBX6O95503 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.32■□□□□ 0.68
CBX6O95503 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CBX6O95503 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.32■□□□□ 0.68
CBX6O95503 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX6O95503 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX6O95503 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CBX6O95503 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
CBX6O95503 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX6O95503 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX6O95503 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CBX6O95503 PRORSD1P-201ENST00000295112 541 ntBASIC19.31■□□□□ 0.68
CBX6O95503 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 MIPEPP3-201ENST00000412105 444 ntBASIC19.31■□□□□ 0.68
CBX6O95503 AC010141.2-201ENST00000452426 721 ntBASIC19.31■□□□□ 0.68
CBX6O95503 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 AC138907.5-202ENST00000569484 235 ntBASIC19.31■□□□□ 0.68
CBX6O95503 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.31■□□□□ 0.68
CBX6O95503 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CBX6O95503 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX6O95503 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CBX6O95503 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX6O95503 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX6O95503 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX6O95503 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms