Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.98■□□□□ 0.47
NKX2-2O95096 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NKX2-2O95096 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NKX2-2O95096 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NKX2-2O95096 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NKX2-2O95096 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX2-2O95096 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 C1QL1P1-201ENST00000568105 661 ntBASIC17.98■□□□□ 0.47
NKX2-2O95096 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NKX2-2O95096 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NKX2-2O95096 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
NKX2-2O95096 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NKX2-2O95096 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.98■□□□□ 0.47
NKX2-2O95096 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-2O95096 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.98■□□□□ 0.47
NKX2-2O95096 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-2O95096 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NKX2-2O95096 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.97■□□□□ 0.47
NKX2-2O95096 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-2O95096 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NKX2-2O95096 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-2O95096 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NKX2-2O95096 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.97■□□□□ 0.47
NKX2-2O95096 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-2O95096 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-2O95096 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.97■□□□□ 0.47
NKX2-2O95096 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NKX2-2O95096 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.97■□□□□ 0.47
NKX2-2O95096 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.97■□□□□ 0.47
NKX2-2O95096 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-2O95096 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.97■□□□□ 0.47
NKX2-2O95096 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX2-2O95096 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.97■□□□□ 0.47
NKX2-2O95096 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-2O95096 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-2O95096 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-2O95096 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-2O95096 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-2O95096 KRT16P5-201ENST00000455284 522 ntBASIC17.96■□□□□ 0.47
NKX2-2O95096 FAM201B-201ENST00000458407 597 ntBASIC17.96■□□□□ 0.47
NKX2-2O95096 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NKX2-2O95096 AC110285.5-201ENST00000611501 352 ntBASIC17.96■□□□□ 0.47
NKX2-2O95096 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-2O95096 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-2O95096 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-2O95096 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.96■□□□□ 0.47
NKX2-2O95096 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-2O95096 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.96■□□□□ 0.46
NKX2-2O95096 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.96■□□□□ 0.46
NKX2-2O95096 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
NKX2-2O95096 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NKX2-2O95096 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NKX2-2O95096 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX2-2O95096 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NKX2-2O95096 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.95■□□□□ 0.46
NKX2-2O95096 TSPY20P-201ENST00000450910 630 ntBASIC17.95■□□□□ 0.46
NKX2-2O95096 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX2-2O95096 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NKX2-2O95096 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX2-2O95096 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.95■□□□□ 0.46
NKX2-2O95096 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NKX2-2O95096 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX2-2O95096 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NKX2-2O95096 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX2-2O95096 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms