Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
BEST1O76090 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 MESTP1-201ENST00000404287 994 ntBASIC20.48■□□□□ 0.87
BEST1O76090 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.48■□□□□ 0.87
BEST1O76090 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.48■□□□□ 0.87
BEST1O76090 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.48■□□□□ 0.87
BEST1O76090 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.48■□□□□ 0.87
BEST1O76090 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.48■□□□□ 0.87
BEST1O76090 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.48■□□□□ 0.87
BEST1O76090 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
BEST1O76090 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.48■□□□□ 0.87
BEST1O76090 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST1O76090 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.48■□□□□ 0.87
BEST1O76090 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.47■□□□□ 0.87
BEST1O76090 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BEST1O76090 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST1O76090 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST1O76090 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BEST1O76090 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST1O76090 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST1O76090 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST1O76090 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST1O76090 AC011506.1-201ENST00000474329 610 ntBASIC20.47■□□□□ 0.87
BEST1O76090 AC116562.2-201ENST00000507042 360 ntBASIC20.47■□□□□ 0.87
BEST1O76090 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.47■□□□□ 0.87
BEST1O76090 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST1O76090 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST1O76090 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST1O76090 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.47■□□□□ 0.87
BEST1O76090 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.47■□□□□ 0.87
BEST1O76090 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
BEST1O76090 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST1O76090 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST1O76090 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BEST1O76090 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.46■□□□□ 0.87
BEST1O76090 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
BEST1O76090 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
BEST1O76090 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
BEST1O76090 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BEST1O76090 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.46■□□□□ 0.87
BEST1O76090 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.46■□□□□ 0.87
BEST1O76090 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.46■□□□□ 0.87
BEST1O76090 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.46■□□□□ 0.87
BEST1O76090 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.46■□□□□ 0.87
BEST1O76090 AL031985.4-201ENST00000642138 673 ntBASIC20.46■□□□□ 0.87
BEST1O76090 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.46■□□□□ 0.87
BEST1O76090 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BEST1O76090 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST1O76090 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.46■□□□□ 0.87
BEST1O76090 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.45■□□□□ 0.87
BEST1O76090 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
BEST1O76090 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.45■□□□□ 0.86
BEST1O76090 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST1O76090 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST1O76090 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.45■□□□□ 0.86
BEST1O76090 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST1O76090 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
BEST1O76090 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST1O76090 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
BEST1O76090 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.45■□□□□ 0.86
BEST1O76090 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.45■□□□□ 0.86
BEST1O76090 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST1O76090 AC131212.4-201ENST00000623606 975 ntBASIC20.45■□□□□ 0.86
BEST1O76090 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
BEST1O76090 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
BEST1O76090 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST1O76090 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST1O76090 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.44■□□□□ 0.86
BEST1O76090 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST1O76090 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST1O76090 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.44■□□□□ 0.86
BEST1O76090 AC008040.2-201ENST00000461049 708 ntBASIC20.44■□□□□ 0.86
BEST1O76090 Z85996.1-201ENST00000494644 937 ntBASIC20.44■□□□□ 0.86
BEST1O76090 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.44■□□□□ 0.86
BEST1O76090 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms