Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.91□□□□□ -0.18
LYRM9A8MSI8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYRM9A8MSI8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.91□□□□□ -0.18
LYRM9A8MSI8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYRM9A8MSI8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYRM9A8MSI8 HCG11-201ENST00000411553 5696 ntBASIC13.91□□□□□ -0.18
LYRM9A8MSI8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYRM9A8MSI8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.91□□□□□ -0.18
LYRM9A8MSI8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYRM9A8MSI8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 AC012618.2-201ENST00000428058 849 ntBASIC13.9□□□□□ -0.18
LYRM9A8MSI8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYRM9A8MSI8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
LYRM9A8MSI8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 NIFKP9-201ENST00000419265 221 ntBASIC13.89□□□□□ -0.19
LYRM9A8MSI8 KSR1P1-201ENST00000446298 240 ntBASIC13.89□□□□□ -0.19
LYRM9A8MSI8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 AC073195.1-201ENST00000607241 877 ntBASIC13.89□□□□□ -0.19
LYRM9A8MSI8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYRM9A8MSI8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.88□□□□□ -0.19
LYRM9A8MSI8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms