Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21■□□□□ 0.95
CCDC66A2RUB6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21■□□□□ 0.95
CCDC66A2RUB6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CCDC66A2RUB6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21■□□□□ 0.95
CCDC66A2RUB6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21■□□□□ 0.95
CCDC66A2RUB6 KRT18P11-201ENST00000435214 1283 ntBASIC21■□□□□ 0.95
CCDC66A2RUB6 AC034268.1-201ENST00000441047 882 ntBASIC21■□□□□ 0.95
CCDC66A2RUB6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21■□□□□ 0.95
CCDC66A2RUB6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21■□□□□ 0.95
CCDC66A2RUB6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CCDC66A2RUB6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21■□□□□ 0.95
CCDC66A2RUB6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21■□□□□ 0.95
CCDC66A2RUB6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21■□□□□ 0.95
CCDC66A2RUB6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CCDC66A2RUB6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CCDC66A2RUB6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CCDC66A2RUB6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21■□□□□ 0.95
CCDC66A2RUB6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 AC018470.1-201ENST00000624790 3129 ntBASIC21■□□□□ 0.95
CCDC66A2RUB6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC66A2RUB6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 AL138781.2-201ENST00000617896 1843 ntBASIC20.99■□□□□ 0.95
CCDC66A2RUB6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC66A2RUB6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 AC016405.3-201ENST00000607710 860 ntBASIC20.98■□□□□ 0.95
CCDC66A2RUB6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC66A2RUB6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.97■□□□□ 0.95
CCDC66A2RUB6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC66A2RUB6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms