Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 AL355472.2-201ENST00000422958 438 ntBASIC19.45■□□□□ 0.7
CCDC189A1A4V9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.45■□□□□ 0.7
CCDC189A1A4V9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CCDC189A1A4V9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 AC073210.2-201ENST00000430369 194 ntBASIC19.43■□□□□ 0.7
CCDC189A1A4V9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC189A1A4V9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 KRT17P1-201ENST00000399211 1546 ntBASIC19.42■□□□□ 0.7
CCDC189A1A4V9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 LSM12P1-201ENST00000411836 588 ntBASIC19.42■□□□□ 0.7
CCDC189A1A4V9 AC093787.1-201ENST00000450396 207 ntBASIC19.42■□□□□ 0.7
CCDC189A1A4V9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC189A1A4V9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms