Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 AL138781.2-201ENST00000617896 1843 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AC096631.2-201ENST00000436136 790 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AC105265.2-201ENST00000467189 838 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUX4L2-201ENST00000561772 1275 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AF213884.3-201ENST00000563833 479 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AP001160.3-201ENST00000601484 763 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUX4L6-201ENST00000626483 1275 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUX4L1-201ENST00000627662 1275 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUX4L8-201ENST00000629013 1275 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUX4L3-201ENST00000630187 1275 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUX4L7-201ENST00000630678 1275 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DUX4L5-201ENST00000630834 1275 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AC104581.1-202ENST00000635932 2618 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 AL049812.1-201ENST00000432563 2267 ntBASIC15.03■□□□□ -0
TRAV34A0A0B4J273 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV34A0A0B4J273 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.02■□□□□ -0
TRAV34A0A0B4J273 AC104187.1-201ENST00000607510 612 ntBASIC15.02■□□□□ -0
TRAV34A0A0B4J273 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 NOC2LP1-202ENST00000452600 2235 ntBASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRAV34A0A0B4J273 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV34A0A0B4J273 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV34A0A0B4J273 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV34A0A0B4J273 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV34A0A0B4J273 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV34A0A0B4J273 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV34A0A0B4J273 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms