Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-8A0A0A6YYG3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-8A0A0A6YYG3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
TRBV6-8A0A0A6YYG3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-8A0A0A6YYG3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRBV6-8A0A0A6YYG3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 GUSBP6-202ENST00000438529 1198 ntBASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 RPS2P52-201ENST00000469610 820 ntBASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 AL121906.2-201ENST00000621597 723 ntBASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-8A0A0A6YYG3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-8A0A0A6YYG3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TRBV6-8A0A0A6YYG3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC060766.5-201ENST00000590539 871 ntBASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MYC-209ENST00000641252 345 ntBASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms