Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 AC007322.1-201ENST00000426983 750 ntBASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 AC231657.2-201ENST00000624556 255 ntBASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MRPS28Q9Y2Q9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 AC090340.1-201ENST00000620778 4980 ntBASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 MIR5787-201ENST00000611784 55 ntBASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 BID-214ENST00000617586 542 ntTSL 5 BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 AC018553.1-201ENST00000616682 1458 ntBASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPS28Q9Y2Q9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MRPS28Q9Y2Q9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
MRPS28Q9Y2Q9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MRPS28Q9Y2Q9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRPS28Q9Y2Q9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MRPS28Q9Y2Q9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.77■□□□□ 0.27
MRPS28Q9Y2Q9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.77■□□□□ 0.27
MRPS28Q9Y2Q9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MRPS28Q9Y2Q9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 KRT17P1-201ENST00000399211 1546 ntBASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 AC006015.1-201ENST00000429970 570 ntBASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPS28Q9Y2Q9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MRPS28Q9Y2Q9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms