Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 AC133681.1-201ENST00000465482 601 ntBASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPH3AQ9Y2J0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 AC211429.1-201ENST00000415277 523 ntBASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPH3AQ9Y2J0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 MIR4497-201ENST00000583208 89 ntBASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.84■□□□□ 0.45
RPH3AQ9Y2J0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.83■□□□□ 0.45
RPH3AQ9Y2J0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms