Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 BID-214ENST00000617586 542 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 AC231657.2-201ENST00000624556 255 ntBASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 KRT8P20-201ENST00000423953 1409 ntBASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 CNN2P6-201ENST00000439038 900 ntBASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 AC105020.6-201ENST00000621523 1217 ntBASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB4Q9UN71 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 HLA-G-202ENST00000376815 851 ntBASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 HLA-G-203ENST00000376818 1127 ntBASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 AC007322.1-201ENST00000426983 750 ntBASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 AC006015.1-201ENST00000429970 570 ntBASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 AL031963.3-201ENST00000606441 850 ntBASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGB4Q9UN71 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 FZD10-202ENST00000539839 3282 ntBASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB4Q9UN71 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 TREX1-205ENST00000625293 1783 ntBASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGB4Q9UN71 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms