Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 AC116351.2-201ENST00000606540 1585 ntBASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42SE2Q9NRR3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 AL161938.1-201ENST00000569833 2180 ntBASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 CROCCP3-202ENST00000420820 1947 ntBASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 AC007322.1-201ENST00000426983 750 ntBASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42SE2Q9NRR3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42SE2Q9NRR3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms