Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 AC105265.2-201ENST00000467189 838 ntBASIC17.69■□□□□ 0.42
HMG20AQ9NP66 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 MIR6084-201ENST00000622012 110 ntBASIC17.69■□□□□ 0.42
HMG20AQ9NP66 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
HMG20AQ9NP66 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 OR6D1P-202ENST00000641007 5290 ntBASIC17.68■□□□□ 0.42
HMG20AQ9NP66 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HMG20AQ9NP66 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 AL354751.1-201ENST00000412768 1863 ntBASIC17.67■□□□□ 0.42
HMG20AQ9NP66 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMG20AQ9NP66 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 BICD1-207ENST00000551848 1962 ntBASIC17.66■□□□□ 0.42
HMG20AQ9NP66 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 MIR638-201ENST00000385237 100 ntBASIC17.66■□□□□ 0.42
HMG20AQ9NP66 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMG20AQ9NP66 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms