Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 CDV3P1-201ENST00000471403 739 ntBASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SMIM4Q8WVI0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 CCDC92B-201ENST00000575506 885 ntBASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM4Q8WVI0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 AL035685.1-201ENST00000636663 812 ntBASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 KRT8P20-201ENST00000423953 1409 ntBASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 PHGDH-210ENST00000641115 1638 ntBASIC16.67■□□□□ 0.26
SMIM4Q8WVI0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 AL136162.1-201ENST00000607711 1078 ntBASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms