Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AL158211.5-201ENST00000623583 2518 ntBASIC17.69■□□□□ 0.42
RNF138Q8WVD3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 MESTP1-201ENST00000404287 994 ntBASIC17.69■□□□□ 0.42
RNF138Q8WVD3 FAM197Y1-201ENST00000421178 764 ntBASIC17.69■□□□□ 0.42
RNF138Q8WVD3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 AC116562.2-201ENST00000507042 360 ntBASIC17.69■□□□□ 0.42
RNF138Q8WVD3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 Z82202.1-201ENST00000623446 1880 ntBASIC17.69■□□□□ 0.42
RNF138Q8WVD3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF138Q8WVD3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 NUDT16P1-203ENST00000513809 620 ntBASIC17.68■□□□□ 0.42
RNF138Q8WVD3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 AC131212.4-201ENST00000623606 975 ntBASIC17.68■□□□□ 0.42
RNF138Q8WVD3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 CR392000.1-201ENST00000624770 1228 ntBASIC17.68■□□□□ 0.42
RNF138Q8WVD3 AL031985.4-201ENST00000642138 673 ntBASIC17.68■□□□□ 0.42
RNF138Q8WVD3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF138Q8WVD3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 KRT8P41-201ENST00000533985 1514 ntBASIC17.67■□□□□ 0.42
RNF138Q8WVD3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 MIR4497-201ENST00000583208 89 ntBASIC17.67■□□□□ 0.42
RNF138Q8WVD3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF138Q8WVD3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms