Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 TSPY19P-201ENST00000418461 509 ntBASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 TSPY18P-201ENST00000441642 509 ntBASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 TPSP2-201ENST00000561760 610 ntBASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 AC093525.10-201ENST00000625130 1569 ntBASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 MRPL3P1-201ENST00000400109 1033 ntBASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALMS1Q8TCU4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 TSSC2-201ENST00000450217 709 ntBASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 BX119927.1-201ENST00000636596 1552 ntBASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 KRT18P31-201ENST00000506277 1292 ntBASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 AC079781.3-201ENST00000449110 356 ntBASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 AC106795.1-205ENST00000512851 1056 ntBASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.17□□□□□ -0.3
ALMS1Q8TCU4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 FAAHP1-202ENST00000446499 1238 ntBASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 SLC25A1P1-201ENST00000528351 927 ntBASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 LINC00167-201ENST00000530583 1419 ntBASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms