Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SVIPQ8NHG7 AC116562.4-201ENST00000641316 2276 ntBASIC12.28□□□□□ -0.44
SVIPQ8NHG7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 AC107918.4-201ENST00000641966 3141 ntBASIC12.28□□□□□ -0.44
SVIPQ8NHG7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 AL009178.2-201ENST00000597278 2719 ntBASIC12.28□□□□□ -0.44
SVIPQ8NHG7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SVIPQ8NHG7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SVIPQ8NHG7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 TSPY26P-202ENST00000565928 3884 ntBASIC12.27□□□□□ -0.45
SVIPQ8NHG7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SVIPQ8NHG7 AL512274.1-201ENST00000562471 2027 ntBASIC12.27□□□□□ -0.45
SVIPQ8NHG7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SVIPQ8NHG7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms