Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 KSR1P1-201ENST00000446298 240 ntBASIC20.12■□□□□ 0.81
LGI2Q8N0V4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 RNF165-205ENST00000588679 2904 ntBASIC20.12■□□□□ 0.81
LGI2Q8N0V4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LGI2Q8N0V4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LGI2Q8N0V4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 KRT16P1-201ENST00000399124 1418 ntBASIC20.1■□□□□ 0.81
LGI2Q8N0V4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
LGI2Q8N0V4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 KRT17P2-201ENST00000300992 1314 ntBASIC20.09■□□□□ 0.81
LGI2Q8N0V4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 AL355355.2-201ENST00000442321 338 ntBASIC20.09■□□□□ 0.81
LGI2Q8N0V4 MIR4785-201ENST00000585005 73 ntBASIC20.09■□□□□ 0.81
LGI2Q8N0V4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 AC026471.5-201ENST00000615068 467 ntBASIC20.09■□□□□ 0.81
LGI2Q8N0V4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LGI2Q8N0V4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
LGI2Q8N0V4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LGI2Q8N0V4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LGI2Q8N0V4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LGI2Q8N0V4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LGI2Q8N0V4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.08■□□□□ 0.81
LGI2Q8N0V4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms