Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 AC092666.2-201ENST00000613287 246 ntBASIC19.56■□□□□ 0.72
PACS2Q86VP3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PACS2Q86VP3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.56■□□□□ 0.72
PACS2Q86VP3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PACS2Q86VP3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PACS2Q86VP3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PACS2Q86VP3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PACS2Q86VP3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PACS2Q86VP3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PACS2Q86VP3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PACS2Q86VP3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PACS2Q86VP3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.55■□□□□ 0.72
PACS2Q86VP3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.54■□□□□ 0.72
PACS2Q86VP3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.54■□□□□ 0.72
PACS2Q86VP3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.54■□□□□ 0.72
PACS2Q86VP3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PACS2Q86VP3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 AC055733.4-201ENST00000638462 1354 ntBASIC19.54■□□□□ 0.72
PACS2Q86VP3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
PACS2Q86VP3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PACS2Q86VP3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PACS2Q86VP3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.54■□□□□ 0.72
PACS2Q86VP3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS2Q86VP3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.53■□□□□ 0.72
PACS2Q86VP3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS2Q86VP3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.53■□□□□ 0.72
PACS2Q86VP3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS2Q86VP3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS2Q86VP3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.53■□□□□ 0.72
PACS2Q86VP3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PACS2Q86VP3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.53■□□□□ 0.72
PACS2Q86VP3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.53■□□□□ 0.72
PACS2Q86VP3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS2Q86VP3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS2Q86VP3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS2Q86VP3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.53■□□□□ 0.72
PACS2Q86VP3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS2Q86VP3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PACS2Q86VP3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PACS2Q86VP3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PACS2Q86VP3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS2Q86VP3 AP006587.3-201ENST00000525742 1516 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms