Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 AC004980.1-204ENST00000429707 299 ntBASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 MIR6786-201ENST00000616843 113 ntBASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 AP001271.2-201ENST00000624018 1556 ntBASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 AC011506.1-201ENST00000474329 610 ntBASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 FITM1-202ENST00000559294 800 ntBASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP1Q6WKZ4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 MESTP1-201ENST00000404287 994 ntBASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 MIR1224-201ENST00000408193 85 ntBASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 HLA-A-209ENST00000638375 975 ntBASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 CYP2D8P-201ENST00000433633 1490 ntBASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB11FIP1Q6WKZ4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP1Q6WKZ4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP1Q6WKZ4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP1Q6WKZ4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP1Q6WKZ4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
RAB11FIP1Q6WKZ4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 B3GAT3P1-201ENST00000471720 806 ntBASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 NAPSB-206ENST00000562112 1266 ntBASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 AC026271.3-201ENST00000571884 352 ntBASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 AIRN-201ENST00000601203 4374 ntBASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 AL691432.2-201ENST00000607222 2038 ntBASIC19.58■□□□□ 0.72
RAB11FIP1Q6WKZ4 LINC01568-207ENST00000641790 1380 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms