Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 CDCA4P2-201ENST00000441182 718 ntBASIC16.95■□□□□ 0.3
C11orf88Q6PI97 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 RAP2CP1-201ENST00000605103 478 ntBASIC16.95■□□□□ 0.3
C11orf88Q6PI97 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 AC006970.2-201ENST00000450065 779 ntBASIC16.94■□□□□ 0.3
C11orf88Q6PI97 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
C11orf88Q6PI97 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 FZD10-202ENST00000539839 3282 ntBASIC16.93■□□□□ 0.3
C11orf88Q6PI97 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 HLA-L-209ENST00000420110 1011 ntBASIC16.93■□□□□ 0.3
C11orf88Q6PI97 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 AC011767.1-201ENST00000617410 1153 ntBASIC16.93■□□□□ 0.3
C11orf88Q6PI97 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
C11orf88Q6PI97 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C11orf88Q6PI97 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms