Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.73■□□□□ 0.11
TMEM88Q6PEY1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM88Q6PEY1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM88Q6PEY1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM88Q6PEY1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 EDA-201ENST00000338901 1233 ntBASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 AL138724.1-201ENST00000606771 1088 ntBASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM88Q6PEY1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 DUX4L4-201ENST00000566884 1269 ntBASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 pRNA.6-201ENST00000610482 90 ntBASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 pRNA.5-201ENST00000612139 90 ntBASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 AC011298.3-201ENST00000615796 283 ntBASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 pRNA.11-201ENST00000618423 90 ntBASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 pRNA.13-201ENST00000619112 90 ntBASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 AL355001.2-201ENST00000620617 1191 ntBASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM88Q6PEY1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM88Q6PEY1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM88Q6PEY1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM88Q6PEY1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM88Q6PEY1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM88Q6PEY1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TMEM88Q6PEY1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 MIR3181-201ENST00000578512 73 ntBASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM88Q6PEY1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms