Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 SFPQ-202ENST00000460428 464 ntTSL 27.43□□□□□ -1.221e-7■■□□□ 11.8
LSM11P83369 SFPQ-205ENST00000468598 2835 ntTSL 1 (best)6.59□□□□□ -1.351e-7■■□□□ 11.8
LSM11P83369 SFPQ-210ENST00000490668 434 ntTSL 25.05□□□□□ -1.61e-7■■□□□ 11.8
LSM11P83369 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.7□□□□□ -0.383e-6■■□□□ 11.7
LSM11P83369 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.498e-8■■□□□ 11.7
LSM11P83369 NOP56-220ENST00000616692 2662 ntTSL 1 (best)14.38□□□□□ -0.118e-8■■□□□ 11.7
LSM11P83369 NOP56-219ENST00000612233 2980 nt12.71□□□□□ -0.388e-8■■□□□ 11.7
LSM11P83369 NOP56-216ENST00000492135 1143 ntTSL 1 (best)12.58□□□□□ -0.48e-8■■□□□ 11.7
LSM11P83369 NOP56-202ENST00000415272 1628 ntTSL 510.58□□□□□ -0.728e-8■■□□□ 11.7
LSM11P83369 NOP56-206ENST00000466447 1094 ntTSL 210.29□□□□□ -0.768e-8■■□□□ 11.7
LSM11P83369 NOP56-207ENST00000467196 1320 ntTSL 59.4□□□□□ -0.98e-8■■□□□ 11.7
LSM11P83369 NOP56-208ENST00000467857 735 ntTSL 29.11□□□□□ -0.958e-8■■□□□ 11.7
LSM11P83369 NOP56-205ENST00000462630 859 ntTSL 28.13□□□□□ -1.118e-8■■□□□ 11.7
LSM11P83369 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.53□□□□□ -0.088e-7■■□□□ 11.7
LSM11P83369 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.218e-7■■□□□ 11.7
LSM11P83369 MTA1-211ENST00000481206 842 ntTSL 218.03■□□□□ 0.484e-8■■□□□ 11.7
LSM11P83369 MTA1-215ENST00000494981 509 ntTSL 313.29□□□□□ -0.284e-8■■□□□ 11.7
LSM11P83369 MTA1-205ENST00000426567 568 ntTSL 312.4□□□□□ -0.424e-8■■□□□ 11.7
LSM11P83369 SRSF11-214ENST00000484162 4008 ntTSL 1 (best)5.95□□□□□ -1.466e-7■■□□□ 11.7
LSM11P83369 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.28□□□□□ -1.566e-7■■□□□ 11.7
LSM11P83369 SRSF11-206ENST00000461935 3501 ntTSL 1 (best)4.22□□□□□ -1.736e-7■■□□□ 11.7
LSM11P83369 PHKA2-204ENST00000469645 728 ntTSL 515.42■□□□□ 0.064e-8■■□□□ 11.7
LSM11P83369 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC10.47□□□□□ -0.732e-7■■□□□ 11.7
LSM11P83369 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.792e-7■■□□□ 11.7
LSM11P83369 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.942e-7■■□□□ 11.7
LSM11P83369 CFB-280ENST00000482312 764 ntTSL 27.46□□□□□ -1.222e-7■■□□□ 11.7
LSM11P83369 CFB-282ENST00000483004 940 ntTSL 57.04□□□□□ -1.282e-7■■□□□ 11.7
LSM11P83369 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC12.14□□□□□ -0.476e-6■■□□□ 11.7
LSM11P83369 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.426e-6■■□□□ 11.7
LSM11P83369 INTS4-201ENST00000433818 3459 ntTSL 1 (best)5.36□□□□□ -1.556e-6■■□□□ 11.7
LSM11P83369 DDX5-205ENST00000577922 996 ntTSL 517.96■□□□□ 0.472e-7■■□□□ 11.7
LSM11P83369 DDX5-228ENST00000584279 676 ntTSL 317.96■□□□□ 0.472e-7■■□□□ 11.7
LSM11P83369 DDX5-220ENST00000581806 576 ntTSL 414.37□□□□□ -0.112e-7■■□□□ 11.7
LSM11P83369 DDX5-219ENST00000581697 580 ntTSL 513.76□□□□□ -0.212e-7■■□□□ 11.7
LSM11P83369 DDX5-232ENST00000585111 1051 ntTSL 213.57□□□□□ -0.242e-7■■□□□ 11.7
LSM11P83369 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13□□□□□ -0.332e-7■■□□□ 11.7
LSM11P83369 DDX5-207ENST00000578400 575 ntTSL 512.3□□□□□ -0.442e-7■■□□□ 11.7
LSM11P83369 DDX5-233ENST00000585223 699 ntTSL 29.96□□□□□ -0.822e-7■■□□□ 11.7
LSM11P83369 DDX5-231ENST00000585060 572 ntTSL 49.62□□□□□ -0.872e-7■■□□□ 11.7
LSM11P83369 AP1G2-217ENST00000555118 362 ntTSL 510.8□□□□□ -0.688e-10■■□□□ 11.7
LSM11P83369 TIAL1-211ENST00000489822 2222 ntTSL 215.46■□□□□ 0.073e-8■■□□□ 11.7
LSM11P83369 TIAL1-207ENST00000463089 907 ntTSL 515.12■□□□□ 0.013e-8■■□□□ 11.7
LSM11P83369 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)13.89□□□□□ -0.193e-8■■□□□ 11.7
LSM11P83369 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.753e-8■■□□□ 11.7
LSM11P83369 TIAL1-209ENST00000470781 1727 ntTSL 27.75□□□□□ -1.173e-8■■□□□ 11.7
LSM11P83369 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.29□□□□□ -1.43e-8■■□□□ 11.7
LSM11P83369 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.429e-8■■□□□ 11.7
LSM11P83369 PABPC1L-216ENST00000490798 1384 ntTSL 316.94■□□□□ 0.39e-8■■□□□ 11.7
LSM11P83369 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.289e-8■■□□□ 11.7
LSM11P83369 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC11.47□□□□□ -0.579e-8■■□□□ 11.7
LSM11P83369 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC11.44□□□□□ -0.589e-8■■□□□ 11.7
LSM11P83369 PABPC1L-211ENST00000476056 1214 ntTSL 510.16□□□□□ -0.789e-8■■□□□ 11.7
LSM11P83369 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC8.36□□□□□ -1.079e-8■■□□□ 11.7
LSM11P83369 PABPC1L-212ENST00000479873 1178 ntTSL 27.89□□□□□ -1.159e-8■■□□□ 11.7
LSM11P83369 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.495e-7■■□□□ 11.7
LSM11P83369 RBM14-RBM4-202ENST00000421355 2034 ntTSL 217.71■□□□□ 0.425e-7■■□□□ 11.7
LSM11P83369 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.16■□□□□ 0.185e-7■■□□□ 11.7
LSM11P83369 RBM14-RBM4-204ENST00000511114 523 ntTSL 410.83□□□□□ -0.685e-7■■□□□ 11.7
LSM11P83369 MAMDC4-203ENST00000479475 2603 ntTSL 1 (best)17.88■□□□□ 0.452e-8■■□□□ 11.7
LSM11P83369 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.222e-6■■□□□ 11.6
LSM11P83369 DAZAP1-206ENST00000587833 560 ntTSL 59.19□□□□□ -0.942e-7■■□□□ 11.6
LSM11P83369 RBM39-240ENST00000495293 759 ntTSL 210.82□□□□□ -0.685e-15■■□□□ 11.6
LSM11P83369 PRODH2-202ENST00000587695 1956 ntTSL 217.1■□□□□ 0.337e-7■■□□□ 11.6
LSM11P83369 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.147e-7■■□□□ 11.6
LSM11P83369 PRODH2-204ENST00000588266 567 ntTSL 313.9□□□□□ -0.187e-7■■□□□ 11.6
LSM11P83369 PRODH2-203ENST00000587808 515 ntTSL 211.24□□□□□ -0.617e-7■■□□□ 11.6
LSM11P83369 FANCA-211ENST00000563510 633 ntTSL 511.74□□□□□ -0.536e-8■■□□□ 11.6
LSM11P83369 PRICKLE4-206ENST00000483200 880 ntTSL 220.61■□□□□ 0.893e-6■■□□□ 11.6
LSM11P83369 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.73e-6■■□□□ 11.6
LSM11P83369 PRICKLE4-205ENST00000463606 366 ntTSL 313.56□□□□□ -0.243e-6■■□□□ 11.6
LSM11P83369 APOM-202ENST00000375918 922 ntTSL 2 BASIC9.82□□□□□ -0.845e-23■■□□□ 11.6
LSM11P83369 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.045e-23■■□□□ 11.6
LSM11P83369 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC8.57□□□□□ -1.045e-23■■□□□ 11.6
LSM11P83369 ITIH3-210ENST00000495622 920 ntTSL 513□□□□□ -0.331e-20■■□□□ 11.6
LSM11P83369 COL9A3-211ENST00000477612 635 ntTSL 318.83■□□□□ 0.62e-10■■□□□ 11.6
LSM11P83369 COL9A3-202ENST00000452372 596 ntTSL 517.56■□□□□ 0.42e-10■■□□□ 11.6
LSM11P83369 PRDX2-203ENST00000466174 1717 ntTSL 1 (best)14.04□□□□□ -0.162e-10■■□□□ 11.6
LSM11P83369 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.365e-6■■□□□ 11.6
LSM11P83369 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC11.51□□□□□ -0.574e-17■■□□□ 11.6
LSM11P83369 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.675e-6■■□□□ 11.6
LSM11P83369 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC10.47□□□□□ -0.732e-10■■□□□ 11.6
LSM11P83369 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.752e-10■■□□□ 11.6
LSM11P83369 HOOK2-213ENST00000589765 108 ntTSL 57.8□□□□□ -1.162e-10■■□□□ 11.6
LSM11P83369 ACADVL-209ENST00000578033 562 ntTSL 216.07■□□□□ 0.162e-13■■□□□ 11.6
LSM11P83369 ACADVL-215ENST00000578809 709 ntTSL 212.09□□□□□ -0.471e-10■■□□□ 11.6
LSM11P83369 ACADVL-211ENST00000578319 718 ntTSL 311.33□□□□□ -0.61e-10■■□□□ 11.6
LSM11P83369 ACADVL-235ENST00000583848 503 ntTSL 310.96□□□□□ -0.652e-13■■□□□ 11.6
LSM11P83369 AP1G2-230ENST00000557162 561 ntTSL 48.98□□□□□ -0.978e-10■■□□□ 11.6
LSM11P83369 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.042e-6■■□□□ 11.6
LSM11P83369 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.787e-8■■□□□ 11.6
LSM11P83369 SEPT5-212ENST00000470814 2353 ntTSL 518.67■□□□□ 0.582e-6■■□□□ 11.6
LSM11P83369 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.37e-8■■□□□ 11.6
LSM11P83369 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)15.51■□□□□ 0.072e-6■■□□□ 11.6
LSM11P83369 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.91□□□□□ -0.187e-8■■□□□ 11.6
LSM11P83369 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)13.66□□□□□ -0.222e-6■■□□□ 11.6
LSM11P83369 FADS3-203ENST00000525094 403 ntTSL 511.08□□□□□ -0.647e-8■■□□□ 11.6
LSM11P83369 AUP1-203ENST00000462297 457 ntTSL 38.82□□□□□ -14e-11■■□□□ 11.6
LSM11P83369 BABAM1-209ENST00000598382 424 ntTSL 28.66□□□□□ -1.027e-8■■□□□ 11.6
LSM11P83369 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.4□□□□□ -0.424e-13■■□□□ 11.6
LSM11P83369 SAT1-206ENST00000463236 735 ntTSL 36.06□□□□□ -1.444e-13■■□□□ 11.6
Retrieved 100 of 11,495 protein–RNA pairs in 166 ms