Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC145285.6-201ENST00000604632 637 ntBASIC18.02■□□□□ 0.48
PER3P56645 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.02■□□□□ 0.48
PER3P56645 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.02■□□□□ 0.48
PER3P56645 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PER3P56645 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PER3P56645 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PER3P56645 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PER3P56645 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PER3P56645 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PER3P56645 AC027702.1-201ENST00000563810 1770 ntBASIC18.02■□□□□ 0.47
PER3P56645 HTR7P1-201ENST00000538670 1336 ntBASIC18.01■□□□□ 0.47
PER3P56645 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.01■□□□□ 0.47
PER3P56645 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
PER3P56645 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.01■□□□□ 0.47
PER3P56645 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.01■□□□□ 0.47
PER3P56645 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.01■□□□□ 0.47
PER3P56645 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.01■□□□□ 0.47
PER3P56645 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.01■□□□□ 0.47
PER3P56645 AL121829.2-201ENST00000620908 328 ntBASIC18.01■□□□□ 0.47
PER3P56645 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 AC018445.3-201ENST00000624177 1945 ntBASIC18.01■□□□□ 0.47
PER3P56645 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.01■□□□□ 0.47
PER3P56645 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PER3P56645 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PER3P56645 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.01■□□□□ 0.47
PER3P56645 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PER3P56645 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18■□□□□ 0.47
PER3P56645 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PER3P56645 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18■□□□□ 0.47
PER3P56645 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18■□□□□ 0.47
PER3P56645 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18■□□□□ 0.47
PER3P56645 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18■□□□□ 0.47
PER3P56645 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18■□□□□ 0.47
PER3P56645 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 MIR6786-201ENST00000616843 113 ntBASIC18■□□□□ 0.47
PER3P56645 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18■□□□□ 0.47
PER3P56645 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PER3P56645 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18■□□□□ 0.47
PER3P56645 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18■□□□□ 0.47
PER3P56645 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PER3P56645 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.99■□□□□ 0.47
PER3P56645 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.99■□□□□ 0.47
PER3P56645 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.99■□□□□ 0.47
PER3P56645 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PER3P56645 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.99■□□□□ 0.47
PER3P56645 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.99■□□□□ 0.47
PER3P56645 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.99■□□□□ 0.47
PER3P56645 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PER3P56645 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.99■□□□□ 0.47
PER3P56645 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 AC073195.1-201ENST00000607241 877 ntBASIC17.99■□□□□ 0.47
PER3P56645 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.99■□□□□ 0.47
PER3P56645 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PER3P56645 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.99■□□□□ 0.47
PER3P56645 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms