Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.55□□□□□ -0.08
CMC4P56277 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.55□□□□□ -0.08
CMC4P56277 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.55□□□□□ -0.08
CMC4P56277 AL353708.3-201ENST00000610272 989 ntBASIC14.55□□□□□ -0.08
CMC4P56277 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.55□□□□□ -0.08
CMC4P56277 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CMC4P56277 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.55□□□□□ -0.08
CMC4P56277 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CMC4P56277 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.54□□□□□ -0.08
CMC4P56277 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CMC4P56277 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CMC4P56277 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CMC4P56277 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.54□□□□□ -0.08
CMC4P56277 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CMC4P56277 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 KSR1P1-201ENST00000446298 240 ntBASIC14.54□□□□□ -0.08
CMC4P56277 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.54□□□□□ -0.08
CMC4P56277 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.54□□□□□ -0.08
CMC4P56277 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.54□□□□□ -0.08
CMC4P56277 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 HTR7P1-201ENST00000538670 1336 ntBASIC14.54□□□□□ -0.08
CMC4P56277 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.54□□□□□ -0.08
CMC4P56277 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
CMC4P56277 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.54□□□□□ -0.08
CMC4P56277 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CMC4P56277 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CMC4P56277 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.54□□□□□ -0.08
CMC4P56277 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CMC4P56277 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CMC4P56277 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.53□□□□□ -0.08
CMC4P56277 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CMC4P56277 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.53□□□□□ -0.08
CMC4P56277 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.53□□□□□ -0.08
CMC4P56277 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CMC4P56277 AC012618.2-201ENST00000428058 849 ntBASIC14.53□□□□□ -0.08
CMC4P56277 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CMC4P56277 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 C1QL1P1-201ENST00000568105 661 ntBASIC14.53□□□□□ -0.08
CMC4P56277 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.53□□□□□ -0.08
CMC4P56277 AC073195.1-201ENST00000607241 877 ntBASIC14.53□□□□□ -0.08
CMC4P56277 AC131212.4-201ENST00000623606 975 ntBASIC14.53□□□□□ -0.08
CMC4P56277 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CMC4P56277 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.53□□□□□ -0.08
CMC4P56277 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.53□□□□□ -0.08
CMC4P56277 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMC4P56277 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.52□□□□□ -0.08
CMC4P56277 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CMC4P56277 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMC4P56277 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMC4P56277 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMC4P56277 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
CMC4P56277 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMC4P56277 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CMC4P56277 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.52□□□□□ -0.08
CMC4P56277 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMC4P56277 AL157384.1-201ENST00000445995 2473 ntBASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms