Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
RXRBP28702 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC25.71■■□□□ 1.71
RXRBP28702 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RXRBP28702 MIR940-201ENST00000401276 94 ntBASIC25.71■■□□□ 1.71
RXRBP28702 MOK-208ENST00000519058 917 ntTSL 2 BASIC25.71■■□□□ 1.71
RXRBP28702 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC25.71■■□□□ 1.71
RXRBP28702 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC25.71■■□□□ 1.71
RXRBP28702 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RXRBP28702 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC25.71■■□□□ 1.71
RXRBP28702 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RXRBP28702 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RXRBP28702 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.71■■□□□ 1.71
RXRBP28702 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RXRBP28702 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.71■■□□□ 1.71
RXRBP28702 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RXRBP28702 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RXRBP28702 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RXRBP28702 AKR1C7P-201ENST00000305623 895 ntBASIC25.7■■□□□ 1.7
RXRBP28702 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RXRBP28702 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC25.7■■□□□ 1.7
RXRBP28702 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC25.7■■□□□ 1.7
RXRBP28702 AC104819.1-201ENST00000504587 486 ntBASIC25.7■■□□□ 1.7
RXRBP28702 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC25.7■■□□□ 1.7
RXRBP28702 AL773604.1-201ENST00000617417 272 ntBASIC25.7■■□□□ 1.7
RXRBP28702 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RXRBP28702 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RXRBP28702 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
RXRBP28702 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC25.69■■□□□ 1.7
RXRBP28702 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC25.69■■□□□ 1.7
RXRBP28702 HNRNPA1P28-201ENST00000424481 961 ntBASIC25.69■■□□□ 1.7
RXRBP28702 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC25.69■■□□□ 1.7
RXRBP28702 AC244107.1-201ENST00000442033 332 ntBASIC25.69■■□□□ 1.7
RXRBP28702 WDR6-223ENST00000627177 207 ntTSL 2 BASIC25.69■■□□□ 1.7
RXRBP28702 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
RXRBP28702 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RXRBP28702 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.68■■□□□ 1.7
RXRBP28702 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RXRBP28702 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.68■■□□□ 1.7
RXRBP28702 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC25.68■■□□□ 1.7
RXRBP28702 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
RXRBP28702 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
RXRBP28702 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC25.68■■□□□ 1.7
RXRBP28702 MIR3197-201ENST00000582241 73 ntBASIC25.68■■□□□ 1.7
RXRBP28702 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 AC127496.7-201ENST00000625110 1798 ntBASIC25.68■■□□□ 1.7
RXRBP28702 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.68■■□□□ 1.7
RXRBP28702 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.68■■□□□ 1.7
RXRBP28702 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
RXRBP28702 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.68■■□□□ 1.7
RXRBP28702 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.67■■□□□ 1.7
RXRBP28702 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.67■■□□□ 1.7
RXRBP28702 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RXRBP28702 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RXRBP28702 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RXRBP28702 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC25.67■■□□□ 1.7
RXRBP28702 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC25.67■■□□□ 1.7
RXRBP28702 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC25.67■■□□□ 1.7
RXRBP28702 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.67■■□□□ 1.7
RXRBP28702 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RXRBP28702 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RXRBP28702 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.67■■□□□ 1.7
RXRBP28702 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RXRBP28702 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RXRBP28702 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RXRBP28702 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
RXRBP28702 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RXRBP28702 SAPCD2P3-201ENST00000455031 850 ntBASIC25.66■■□□□ 1.7
RXRBP28702 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC25.66■■□□□ 1.7
RXRBP28702 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC25.66■■□□□ 1.7
RXRBP28702 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC25.66■■□□□ 1.7
RXRBP28702 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RXRBP28702 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.66■■□□□ 1.7
RXRBP28702 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
RXRBP28702 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RXRBP28702 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC25.65■■□□□ 1.7
RXRBP28702 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RXRBP28702 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
RXRBP28702 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC25.65■■□□□ 1.7
RXRBP28702 ABR-204ENST00000543210 1049 ntTSL 2 BASIC25.65■■□□□ 1.7
RXRBP28702 AL160286.2-201ENST00000567150 934 ntBASIC25.65■■□□□ 1.7
RXRBP28702 NAA38-203ENST00000575071 553 ntTSL 2 BASIC25.65■■□□□ 1.7
RXRBP28702 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RXRBP28702 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RXRBP28702 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RXRBP28702 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms