Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 NEFHP1-201ENST00000412845 2629 ntBASIC14.5□□□□□ -0.09
SMIM17P0DL12 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 AL691432.2-201ENST00000607222 2038 ntBASIC14.5□□□□□ -0.09
SMIM17P0DL12 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 KRT18P20-201ENST00000548986 1279 ntBASIC14.5□□□□□ -0.09
SMIM17P0DL12 AP001160.3-201ENST00000601484 763 ntBASIC14.5□□□□□ -0.09
SMIM17P0DL12 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 AL136967.2-201ENST00000623968 743 ntBASIC14.5□□□□□ -0.09
SMIM17P0DL12 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.5□□□□□ -0.09
SMIM17P0DL12 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM17P0DL12 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM17P0DL12 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 SLC7A5P2-201ENST00000553010 536 ntBASIC14.49□□□□□ -0.09
SMIM17P0DL12 AC104187.1-201ENST00000607510 612 ntBASIC14.49□□□□□ -0.09
SMIM17P0DL12 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.49□□□□□ -0.09
SMIM17P0DL12 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM17P0DL12 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 IRS3P-201ENST00000223076 1006 ntBASIC14.48□□□□□ -0.09
SMIM17P0DL12 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 AC097381.1-201ENST00000429019 1296 ntBASIC14.48□□□□□ -0.09
SMIM17P0DL12 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM17P0DL12 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.48□□□□□ -0.09
SMIM17P0DL12 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms