Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND3P03897 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
MT-ND3P03897 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.83■□□□□ 0.77
MT-ND3P03897 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND3P03897 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND3P03897 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
MT-ND3P03897 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.83■□□□□ 0.77
MT-ND3P03897 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND3P03897 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.83■□□□□ 0.77
MT-ND3P03897 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND3P03897 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND3P03897 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
MT-ND3P03897 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.83■□□□□ 0.77
MT-ND3P03897 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND3P03897 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND3P03897 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND3P03897 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.83■□□□□ 0.77
MT-ND3P03897 AC093787.1-201ENST00000450396 207 ntBASIC19.83■□□□□ 0.77
MT-ND3P03897 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
MT-ND3P03897 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
MT-ND3P03897 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND3P03897 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND3P03897 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND3P03897 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MT-ND3P03897 AP001271.2-201ENST00000624018 1556 ntBASIC19.83■□□□□ 0.76
MT-ND3P03897 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
MT-ND3P03897 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.82■□□□□ 0.76
MT-ND3P03897 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.82■□□□□ 0.76
MT-ND3P03897 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 BX276092.2-201ENST00000417668 665 ntBASIC19.82■□□□□ 0.76
MT-ND3P03897 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.82■□□□□ 0.76
MT-ND3P03897 RARRES2P4-201ENST00000514074 484 ntBASIC19.82■□□□□ 0.76
MT-ND3P03897 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.82■□□□□ 0.76
MT-ND3P03897 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
MT-ND3P03897 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND3P03897 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MT-ND3P03897 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MT-ND3P03897 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MT-ND3P03897 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 HCG11-201ENST00000411553 5696 ntBASIC19.81■□□□□ 0.76
MT-ND3P03897 LINC01465-201ENST00000408887 1940 ntBASIC19.81■□□□□ 0.76
MT-ND3P03897 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.81■□□□□ 0.76
MT-ND3P03897 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.81■□□□□ 0.76
MT-ND3P03897 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 AC098934.4-201ENST00000564127 592 ntBASIC19.81■□□□□ 0.76
MT-ND3P03897 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 AL031963.3-201ENST00000606441 850 ntBASIC19.81■□□□□ 0.76
MT-ND3P03897 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MT-ND3P03897 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
MT-ND3P03897 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND3P03897 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
MT-ND3P03897 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND3P03897 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.8■□□□□ 0.76
MT-ND3P03897 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND3P03897 AC097658.1-201ENST00000475555 843 ntBASIC19.8■□□□□ 0.76
MT-ND3P03897 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND3P03897 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms