Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 ZBTB48-201ENST00000319084 1050 ntTSL 318.51■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.51■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 ABCB8-215ENST00000488370 606 ntTSL 318.5■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 ABCB8-205ENST00000466514 2199 ntTSL 218.5■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 SULT2B1-204ENST00000597923 1423 ntTSL 218.49■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.47■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 TMEM241-215ENST00000582336 625 ntAPPRIS ALT2 TSL 318.47■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 AP4M1-207ENST00000438383 1091 ntTSL 518.47■□□□□ 0.553e-6■■■■■ 137.9
SF3B1O75533 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.45■□□□□ 0.543e-6■■■■■ 137.9
SF3B1O75533 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.543e-6■■■■■ 137.9
SF3B1O75533 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.42■□□□□ 0.543e-6■■■■■ 137.9
SF3B1O75533 RPH3AL-221ENST00000577079 814 ntAPPRIS ALT2 TSL 318.4■□□□□ 0.543e-6■■■■■ 137.9
SF3B1O75533 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.38■□□□□ 0.532e-11■■■■■ 137.9
SF3B1O75533 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.37■□□□□ 0.535e-6■■■■■ 137.9
SF3B1O75533 ABCB8-218ENST00000489192 762 ntTSL 518.37■□□□□ 0.533e-6■■■■■ 137.9
SF3B1O75533 MIER2-205ENST00000619835 1748 ntTSL 318.35■□□□□ 0.533e-6■■■■■ 137.9
SF3B1O75533 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.35■□□□□ 0.533e-6■■■■■ 137.9
SF3B1O75533 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.34■□□□□ 0.533e-6■■■■■ 137.9
SF3B1O75533 DIABLO-215ENST00000541656 732 ntTSL 318.33■□□□□ 0.532e-11■■■■■ 137.9
SF3B1O75533 ALAD-205ENST00000464749 563 ntTSL 418.32■□□□□ 0.523e-6■■■■■ 137.9
SF3B1O75533 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.523e-6■■■■■ 137.9
SF3B1O75533 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.525e-6■■■■■ 137.9
SF3B1O75533 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.29■□□□□ 0.523e-6■■■■■ 137.9
SF3B1O75533 PLK3-204ENST00000465443 2477 ntTSL 518.29■□□□□ 0.523e-6■■■■■ 137.9
SF3B1O75533 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.523e-6■■■■■ 137.9
SF3B1O75533 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.523e-6■■■■■ 137.9
SF3B1O75533 AKT2-232ENST00000578615 877 ntTSL 518.27■□□□□ 0.523e-6■■■■■ 137.9
SF3B1O75533 KIF1A-205ENST00000431776 1072 ntTSL 518.27■□□□□ 0.523e-6■■■■■ 137.9
SF3B1O75533 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.25■□□□□ 0.513e-6■■■■■ 137.9
SF3B1O75533 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.513e-6■■■■■ 137.9
SF3B1O75533 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.513e-6■■■■■ 137.9
SF3B1O75533 MORN1-209ENST00000606372 1960 ntTSL 1 (best)18.22■□□□□ 0.513e-6■■■■■ 137.9
SF3B1O75533 TRAM1-204ENST00000521049 872 ntTSL 518.22■□□□□ 0.513e-6■■■■■ 137.9
SF3B1O75533 MYO1C-216ENST00000574790 555 ntTSL 418.21■□□□□ 0.513e-6■■■■■ 137.9
SF3B1O75533 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.53e-6■■■■■ 137.9
SF3B1O75533 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.53e-6■■■■■ 137.9
SF3B1O75533 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.18■□□□□ 0.53e-6■■■■■ 137.9
SF3B1O75533 TBX18-203ENST00000606325 742 ntTSL 518.17■□□□□ 0.53e-6■■■■■ 137.9
SF3B1O75533 LMF1-215ENST00000570014 882 ntTSL 518.17■□□□□ 0.53e-6■■■■■ 137.9
SF3B1O75533 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.17■□□□□ 0.53e-6■■■■■ 137.9
SF3B1O75533 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.51e-16■■■■■ 137.9
SF3B1O75533 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.15■□□□□ 0.53e-6■■■■■ 137.9
SF3B1O75533 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 ZFP36L1-203ENST00000553375 633 ntTSL 218.12■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 STX18-AS1-204ENST00000512438 549 ntTSL 318.12■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 GP6-204ENST00000465648 859 ntTSL 318.11■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 TNFRSF10A-203ENST00000524158 693 ntTSL 518.11■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 TSPAN32-202ENST00000339046 1202 ntTSL 218.1■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.09■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 KDM6B-203ENST00000570632 1339 ntTSL 518.08■□□□□ 0.493e-6■■■■■ 137.9
SF3B1O75533 TRPM4-203ENST00000594568 532 ntTSL 418.07■□□□□ 0.483e-6■■■■■ 137.9
SF3B1O75533 LINC00240-203ENST00000606878 927 ntTSL 1 (best)18.06■□□□□ 0.483e-6■■■■■ 137.9
SF3B1O75533 ACAP1-203ENST00000570457 870 ntTSL 518.05■□□□□ 0.483e-6■■■■■ 137.9
SF3B1O75533 AC138969.1-202ENST00000536260 2519 ntTSL 218.05■□□□□ 0.482e-11■■■■■ 137.9
SF3B1O75533 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.483e-6■■■■■ 137.9
SF3B1O75533 RFC5-202ENST00000420967 559 ntTSL 318.03■□□□□ 0.483e-6■■■■■ 137.9
SF3B1O75533 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.483e-6■■■■■ 137.9
SF3B1O75533 CNTROB-215ENST00000576922 1468 ntTSL 518.01■□□□□ 0.473e-6■■■■■ 137.9
SF3B1O75533 GALE-207ENST00000459934 1563 ntTSL 518■□□□□ 0.473e-6■■■■■ 137.9
SF3B1O75533 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18■□□□□ 0.473e-6■■■■■ 137.9
SF3B1O75533 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.473e-6■■■■■ 137.9
SF3B1O75533 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.98■□□□□ 0.473e-6■■■■■ 137.9
SF3B1O75533 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.473e-6■■■■■ 137.9
SF3B1O75533 AGBL5-209ENST00000487078 3261 ntTSL 1 (best)17.95■□□□□ 0.462e-11■■■■■ 137.9
SF3B1O75533 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.462e-11■■■■■ 137.9
SF3B1O75533 ZNF335-204ENST00000494955 1893 ntTSL 217.95■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 SH3TC1-207ENST00000503284 560 ntTSL 417.95■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 GCDH-203ENST00000585420 1730 ntTSL 217.94■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 CCNDBP1-215ENST00000569745 1356 ntTSL 517.94■□□□□ 0.462e-11■■■■■ 137.9
SF3B1O75533 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 LARP4-214ENST00000548993 790 ntTSL 517.94■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 RPH3AL-218ENST00000575736 566 ntTSL 517.94■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.94■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 TMEM44-213ENST00000477651 1899 ntTSL 1 (best)17.91■□□□□ 0.461e-16■■■■■ 137.9
SF3B1O75533 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.468e-7■■■■■ 137.9
SF3B1O75533 RPP38-205ENST00000441850 863 ntTSL 217.9■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 OSBP2-213ENST00000453621 895 ntTSL 517.9■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 ACAP1-210ENST00000575425 614 ntTSL 317.9■□□□□ 0.463e-6■■■■■ 137.9
SF3B1O75533 DHRS4-AS1-202ENST00000553454 1492 ntTSL 1 (best)17.88■□□□□ 0.453e-6■■■■■ 137.9
SF3B1O75533 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.87■□□□□ 0.453e-6■■■■■ 137.9
SF3B1O75533 FAM3A-222ENST00000621967 1901 ntTSL 217.87■□□□□ 0.453e-6■■■■■ 137.9
SF3B1O75533 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.453e-6■■■■■ 137.9
SF3B1O75533 GCDH-212ENST00000590530 1871 ntTSL 217.86■□□□□ 0.453e-6■■■■■ 137.9
SF3B1O75533 LMF1-209ENST00000566627 694 ntTSL 317.85■□□□□ 0.453e-6■■■■■ 137.9
SF3B1O75533 GLB1L2-203ENST00000531081 1026 ntTSL 417.84■□□□□ 0.453e-6■■■■■ 137.9
SF3B1O75533 MAEA-215ENST00000512289 2426 ntTSL 217.83■□□□□ 0.453e-6■■■■■ 137.9
SF3B1O75533 TMEM39B-205ENST00000468135 1834 ntTSL 517.83■□□□□ 0.443e-6■■■■■ 137.9
SF3B1O75533 TMTC3-202ENST00000547034 1842 ntTSL 1 (best)17.82■□□□□ 0.443e-6■■■■■ 137.9
SF3B1O75533 AL157935.2-202ENST00000548587 464 ntTSL 417.82■□□□□ 0.443e-6■■■■■ 137.9
SF3B1O75533 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.8■□□□□ 0.443e-6■■■■■ 137.9
SF3B1O75533 TMEM39B-203ENST00000441402 1538 ntTSL 1 (best)17.8■□□□□ 0.443e-6■■■■■ 137.9
SF3B1O75533 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.443e-6■■■■■ 137.9
SF3B1O75533 TSPAN32-206ENST00000446063 1262 ntTSL 1 (best)17.78■□□□□ 0.443e-6■■■■■ 137.9
SF3B1O75533 ENTPD1-AS1-207ENST00000449419 948 ntTSL 317.78■□□□□ 0.443e-6■■■■■ 137.9
SF3B1O75533 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.443e-6■■■■■ 137.9
Retrieved 100 of 46,956 protein–RNA pairs in 1271.4 ms