Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CNOT3O75175 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.88■□□□□ 0.61
CNOT3O75175 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 AC133681.1-201ENST00000465482 601 ntBASIC18.88■□□□□ 0.61
CNOT3O75175 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.88■□□□□ 0.61
CNOT3O75175 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CNOT3O75175 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CNOT3O75175 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNOT3O75175 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CNOT3O75175 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 FP700111.2-201ENST00000619190 1892 ntBASIC18.88■□□□□ 0.61
CNOT3O75175 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.88■□□□□ 0.61
CNOT3O75175 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT3O75175 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 AC239809.2-201ENST00000415381 517 ntBASIC18.87■□□□□ 0.61
CNOT3O75175 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CNOT3O75175 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.87■□□□□ 0.61
CNOT3O75175 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.87■□□□□ 0.61
CNOT3O75175 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.87■□□□□ 0.61
CNOT3O75175 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.87■□□□□ 0.61
CNOT3O75175 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT3O75175 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CNOT3O75175 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT3O75175 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CNOT3O75175 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CNOT3O75175 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT3O75175 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
CNOT3O75175 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT3O75175 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNOT3O75175 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT3O75175 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT3O75175 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 KRASP1-201ENST00000407852 552 ntBASIC18.86■□□□□ 0.61
CNOT3O75175 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT3O75175 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.86■□□□□ 0.61
CNOT3O75175 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT3O75175 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT3O75175 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT3O75175 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNOT3O75175 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT3O75175 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT3O75175 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CNOT3O75175 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT3O75175 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT3O75175 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.85■□□□□ 0.61
CNOT3O75175 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.85■□□□□ 0.61
CNOT3O75175 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT3O75175 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT3O75175 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CNOT3O75175 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT3O75175 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms