Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
DDX39AO00148 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX39AO00148 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX39AO00148 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX39AO00148 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
DDX39AO00148 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
DDX39AO00148 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
DDX39AO00148 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
DDX39AO00148 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
DDX39AO00148 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.97■■□□□ 1.11
DDX39AO00148 NUDT16P1-203ENST00000513809 620 ntBASIC21.97■■□□□ 1.11
DDX39AO00148 BX088651.1-201ENST00000540551 451 ntBASIC21.97■■□□□ 1.11
DDX39AO00148 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.97■■□□□ 1.11
DDX39AO00148 HLA-A-209ENST00000638375 975 ntBASIC21.97■■□□□ 1.11
DDX39AO00148 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX39AO00148 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX39AO00148 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX39AO00148 KRT8P8-201ENST00000434750 1448 ntBASIC21.97■■□□□ 1.11
DDX39AO00148 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX39AO00148 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX39AO00148 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX39AO00148 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX39AO00148 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX39AO00148 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
DDX39AO00148 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.96■■□□□ 1.11
DDX39AO00148 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
DDX39AO00148 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX39AO00148 REXO1L10P-201ENST00000615707 1290 ntBASIC21.96■■□□□ 1.11
DDX39AO00148 REXO1L12P-201ENST00000622156 912 ntBASIC21.96■■□□□ 1.11
DDX39AO00148 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX39AO00148 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.96■■□□□ 1.11
DDX39AO00148 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
DDX39AO00148 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX39AO00148 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX39AO00148 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 LINC01465-201ENST00000408887 1940 ntBASIC21.96■■□□□ 1.11
DDX39AO00148 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX39AO00148 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.95■■□□□ 1.11
DDX39AO00148 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
DDX39AO00148 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX39AO00148 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX39AO00148 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX39AO00148 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
DDX39AO00148 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.95■■□□□ 1.1
DDX39AO00148 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
DDX39AO00148 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.95■■□□□ 1.1
DDX39AO00148 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
DDX39AO00148 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.95■■□□□ 1.1
DDX39AO00148 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX39AO00148 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.95■■□□□ 1.1
DDX39AO00148 AC073912.3-201ENST00000624414 853 ntBASIC21.95■■□□□ 1.1
DDX39AO00148 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.95■■□□□ 1.1
DDX39AO00148 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.95■■□□□ 1.1
DDX39AO00148 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX39AO00148 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
DDX39AO00148 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX39AO00148 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
DDX39AO00148 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX39AO00148 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX39AO00148 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX39AO00148 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX39AO00148 AL445675.2-201ENST00000620291 557 ntBASIC21.94■■□□□ 1.1
DDX39AO00148 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
DDX39AO00148 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX39AO00148 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
DDX39AO00148 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms