Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 AL161938.1-201ENST00000569833 2180 ntBASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 KRT18P20-201ENST00000548986 1279 ntBASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 AC110285.6-201ENST00000617652 491 ntBASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 AP001271.2-201ENST00000624018 1556 ntBASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.71■□□□□ 0.26
MEIS3P1A6NDR6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 AC097381.1-201ENST00000429019 1296 ntBASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 AC019069.1-201ENST00000610008 1333 ntBASIC16.7■□□□□ 0.26
MEIS3P1A6NDR6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 LTB4R2-202ENST00000528054 3092 ntBASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.69■□□□□ 0.26
MEIS3P1A6NDR6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms