Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00959A0A1B0GUT2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 GPX1P1-201ENST00000388829 606 ntBASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 AL162430.1-201ENST00000480705 870 ntBASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 AC090340.1-201ENST00000620778 4980 ntBASIC13.29□□□□□ -0.28
LINC00959A0A1B0GUT2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 AC133552.2-202ENST00000575694 574 ntBASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 MIR5787-201ENST00000611784 55 ntBASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LINC00959A0A1B0GUT2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00959A0A1B0GUT2 AC093503.3-201ENST00000624917 2352 ntBASIC13.27□□□□□ -0.29
LINC00959A0A1B0GUT2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LINC00959A0A1B0GUT2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00959A0A1B0GUT2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
LINC00959A0A1B0GUT2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00959A0A1B0GUT2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00959A0A1B0GUT2 AL390719.1-204ENST00000412397 1219 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms