Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRB4X5D2U9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DRB4X5D2U9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DRB4X5D2U9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DRB4X5D2U9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DRB4X5D2U9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DRB4X5D2U9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DRB4X5D2U9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DRB4X5D2U9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.11■□□□□ 0.65
HLA-DRB4X5D2U9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DRB4X5D2U9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DRB4X5D2U9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DRB4X5D2U9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DRB4X5D2U9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DRB4X5D2U9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DRB4X5D2U9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRB4X5D2U9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRB4X5D2U9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.09■□□□□ 0.65
HLA-DRB4X5D2U9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DRB4X5D2U9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DRB4X5D2U9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HLA-DRB4X5D2U9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DRB4X5D2U9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRB4X5D2U9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HLA-DRB4X5D2U9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DRB4X5D2U9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRB4X5D2U9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRB4X5D2U9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRB4X5D2U9 LINC00273-201ENST00000539813 1452 ntBASIC19.07■□□□□ 0.64
HLA-DRB4X5D2U9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRB4X5D2U9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DRB4X5D2U9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DRB4X5D2U9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DRB4X5D2U9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HLA-DRB4X5D2U9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DRB4X5D2U9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DRB4X5D2U9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DRB4X5D2U9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DRB4X5D2U9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DRB4X5D2U9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DRB4X5D2U9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DRB4X5D2U9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DRB4X5D2U9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DRB4X5D2U9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DRB4X5D2U9 AC135731.1-201ENST00000569415 2548 ntBASIC19.04■□□□□ 0.64
HLA-DRB4X5D2U9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DRB4X5D2U9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DRB4X5D2U9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DRB4X5D2U9 AC142086.6-201ENST00000621154 1765 ntBASIC19.04■□□□□ 0.64
HLA-DRB4X5D2U9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRB4X5D2U9 AC135983.2-203ENST00000454486 1613 ntBASIC19.03■□□□□ 0.64
HLA-DRB4X5D2U9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DRB4X5D2U9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRB4X5D2U9 DUX4L29-201ENST00000425409 679 ntBASIC19.03■□□□□ 0.64
HLA-DRB4X5D2U9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-DRB4X5D2U9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRB4X5D2U9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRB4X5D2U9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DRB4X5D2U9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HLA-DRB4X5D2U9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.02■□□□□ 0.64
HLA-DRB4X5D2U9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRB4X5D2U9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRB4X5D2U9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
HLA-DRB4X5D2U9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRB4X5D2U9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DRB4X5D2U9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DRB4X5D2U9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRB4X5D2U9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRB4X5D2U9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DRB4X5D2U9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRB4X5D2U9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRB4X5D2U9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 AC021231.2-201ENST00000594613 730 ntBASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DRB4X5D2U9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRB4X5D2U9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.99■□□□□ 0.63
HLA-DRB4X5D2U9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DRB4X5D2U9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DRB4X5D2U9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HLA-DRB4X5D2U9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRB4X5D2U9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRB4X5D2U9 WHAMMP2-203ENST00000563942 1603 ntBASIC18.99■□□□□ 0.63
HLA-DRB4X5D2U9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 DRD5P2-201ENST00000421395 2012 ntBASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DRB4X5D2U9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DRB4X5D2U9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms