Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
KDM3AQ9Y4C1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.02■■■□□ 2.24
KDM3AQ9Y4C1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
KDM3AQ9Y4C1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
KDM3AQ9Y4C1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
KDM3AQ9Y4C1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.01■■■□□ 2.24
KDM3AQ9Y4C1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
KDM3AQ9Y4C1 AC016575.1-201ENST00000607026 382 ntBASIC29.01■■■□□ 2.23
KDM3AQ9Y4C1 CR559946.2-201ENST00000623684 991 ntBASIC29.01■■■□□ 2.23
KDM3AQ9Y4C1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
KDM3AQ9Y4C1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29■■■□□ 2.23
KDM3AQ9Y4C1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
KDM3AQ9Y4C1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
KDM3AQ9Y4C1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
KDM3AQ9Y4C1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
KDM3AQ9Y4C1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
KDM3AQ9Y4C1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.99■■■□□ 2.23
KDM3AQ9Y4C1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
KDM3AQ9Y4C1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
KDM3AQ9Y4C1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
KDM3AQ9Y4C1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
KDM3AQ9Y4C1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
KDM3AQ9Y4C1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
KDM3AQ9Y4C1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
KDM3AQ9Y4C1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.96■■■□□ 2.23
KDM3AQ9Y4C1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
KDM3AQ9Y4C1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.96■■■□□ 2.23
KDM3AQ9Y4C1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
KDM3AQ9Y4C1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
KDM3AQ9Y4C1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
KDM3AQ9Y4C1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.95■■■□□ 2.23
KDM3AQ9Y4C1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.95■■■□□ 2.23
KDM3AQ9Y4C1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
KDM3AQ9Y4C1 LINC00273-201ENST00000539813 1452 ntBASIC28.94■■■□□ 2.22
KDM3AQ9Y4C1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
KDM3AQ9Y4C1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
KDM3AQ9Y4C1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
KDM3AQ9Y4C1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
KDM3AQ9Y4C1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.92■■■□□ 2.22
KDM3AQ9Y4C1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
KDM3AQ9Y4C1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.91■■■□□ 2.22
KDM3AQ9Y4C1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.91■■■□□ 2.22
KDM3AQ9Y4C1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
KDM3AQ9Y4C1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.89■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L13-201ENST00000554103 1267 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L15-201ENST00000611059 1267 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L23-201ENST00000615195 1269 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L24-201ENST00000617576 1269 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L22-201ENST00000618238 1269 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L20-201ENST00000619712 1269 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L21-201ENST00000622058 1269 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L10-201ENST00000622460 1267 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 DUX4L25-201ENST00000624915 1269 ntBASIC28.88■■■□□ 2.21
KDM3AQ9Y4C1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KDM3AQ9Y4C1 AC135983.2-203ENST00000454486 1613 ntBASIC28.87■■■□□ 2.21
KDM3AQ9Y4C1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KDM3AQ9Y4C1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.87■■■□□ 2.21
KDM3AQ9Y4C1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KDM3AQ9Y4C1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
KDM3AQ9Y4C1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KDM3AQ9Y4C1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
KDM3AQ9Y4C1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
KDM3AQ9Y4C1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
KDM3AQ9Y4C1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
KDM3AQ9Y4C1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
KDM3AQ9Y4C1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.85■■■□□ 2.21
KDM3AQ9Y4C1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.84■■■□□ 2.21
KDM3AQ9Y4C1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
KDM3AQ9Y4C1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
KDM3AQ9Y4C1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
KDM3AQ9Y4C1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
KDM3AQ9Y4C1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
KDM3AQ9Y4C1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.83■■■□□ 2.21
KDM3AQ9Y4C1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
KDM3AQ9Y4C1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.82■■■□□ 2.2
KDM3AQ9Y4C1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.82■■■□□ 2.2
KDM3AQ9Y4C1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
KDM3AQ9Y4C1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KDM3AQ9Y4C1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KDM3AQ9Y4C1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
KDM3AQ9Y4C1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
KDM3AQ9Y4C1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
KDM3AQ9Y4C1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
KDM3AQ9Y4C1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.8■■■□□ 2.2
KDM3AQ9Y4C1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
KDM3AQ9Y4C1 WHAMMP2-203ENST00000563942 1603 ntBASIC28.8■■■□□ 2.2
KDM3AQ9Y4C1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
KDM3AQ9Y4C1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
KDM3AQ9Y4C1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
KDM3AQ9Y4C1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
KDM3AQ9Y4C1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.79■■■□□ 2.2
KDM3AQ9Y4C1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.79■■■□□ 2.2
KDM3AQ9Y4C1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
KDM3AQ9Y4C1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.79■■■□□ 2.2
KDM3AQ9Y4C1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.79■■■□□ 2.2
KDM3AQ9Y4C1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
KDM3AQ9Y4C1 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.78■■■□□ 2.2
KDM3AQ9Y4C1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.78■■■□□ 2.2
KDM3AQ9Y4C1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.78■■■□□ 2.2
KDM3AQ9Y4C1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms