Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.49■■■□□ 2.63
ECHDC1Q9NTX5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ECHDC1Q9NTX5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
ECHDC1Q9NTX5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ECHDC1Q9NTX5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ECHDC1Q9NTX5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.47■■■□□ 2.63
ECHDC1Q9NTX5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
ECHDC1Q9NTX5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ECHDC1Q9NTX5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ECHDC1Q9NTX5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ECHDC1Q9NTX5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.45■■■□□ 2.63
ECHDC1Q9NTX5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ECHDC1Q9NTX5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ECHDC1Q9NTX5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ECHDC1Q9NTX5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ECHDC1Q9NTX5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ECHDC1Q9NTX5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
ECHDC1Q9NTX5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.44■■■□□ 2.62
ECHDC1Q9NTX5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.44■■■□□ 2.62
ECHDC1Q9NTX5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.44■■■□□ 2.62
ECHDC1Q9NTX5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ECHDC1Q9NTX5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.42■■■□□ 2.62
ECHDC1Q9NTX5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ECHDC1Q9NTX5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
ECHDC1Q9NTX5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ECHDC1Q9NTX5 ABHD17AP4-201ENST00000411545 909 ntBASIC31.41■■■□□ 2.62
ECHDC1Q9NTX5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.41■■■□□ 2.62
ECHDC1Q9NTX5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.41■■■□□ 2.62
ECHDC1Q9NTX5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.41■■■□□ 2.62
ECHDC1Q9NTX5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.41■■■□□ 2.62
ECHDC1Q9NTX5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ECHDC1Q9NTX5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ECHDC1Q9NTX5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
ECHDC1Q9NTX5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ECHDC1Q9NTX5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.4■■■□□ 2.62
ECHDC1Q9NTX5 AC100797.4-201ENST00000631653 1827 ntBASIC31.4■■■□□ 2.62
ECHDC1Q9NTX5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ECHDC1Q9NTX5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.39■■■□□ 2.62
ECHDC1Q9NTX5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
ECHDC1Q9NTX5 ZNRF2P2-203ENST00000454624 420 ntBASIC31.39■■■□□ 2.62
ECHDC1Q9NTX5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
ECHDC1Q9NTX5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.38■■■□□ 2.61
ECHDC1Q9NTX5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
ECHDC1Q9NTX5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ECHDC1Q9NTX5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.35■■■□□ 2.61
ECHDC1Q9NTX5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.35■■■□□ 2.61
ECHDC1Q9NTX5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ECHDC1Q9NTX5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
ECHDC1Q9NTX5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ECHDC1Q9NTX5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.34■■■□□ 2.61
ECHDC1Q9NTX5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
ECHDC1Q9NTX5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ECHDC1Q9NTX5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ECHDC1Q9NTX5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.32■■■□□ 2.6
ECHDC1Q9NTX5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ECHDC1Q9NTX5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ECHDC1Q9NTX5 LINC01971-201ENST00000617888 1048 ntBASIC31.32■■■□□ 2.6
ECHDC1Q9NTX5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
ECHDC1Q9NTX5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ECHDC1Q9NTX5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.31■■■□□ 2.6
ECHDC1Q9NTX5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ECHDC1Q9NTX5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.3■■■□□ 2.6
ECHDC1Q9NTX5 DRD5P2-201ENST00000421395 2012 ntBASIC31.29■■■□□ 2.6
ECHDC1Q9NTX5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
ECHDC1Q9NTX5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ECHDC1Q9NTX5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ECHDC1Q9NTX5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ECHDC1Q9NTX5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ECHDC1Q9NTX5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ECHDC1Q9NTX5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
ECHDC1Q9NTX5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.26■■■□□ 2.6
ECHDC1Q9NTX5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ECHDC1Q9NTX5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.26■■■□□ 2.59
ECHDC1Q9NTX5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ECHDC1Q9NTX5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ECHDC1Q9NTX5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ECHDC1Q9NTX5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.25■■■□□ 2.59
ECHDC1Q9NTX5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ECHDC1Q9NTX5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ECHDC1Q9NTX5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.24■■■□□ 2.59
ECHDC1Q9NTX5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.23■■■□□ 2.59
ECHDC1Q9NTX5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.22■■■□□ 2.59
ECHDC1Q9NTX5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
ECHDC1Q9NTX5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
ECHDC1Q9NTX5 DUX4L11-201ENST00000611504 1267 ntBASIC31.21■■■□□ 2.59
ECHDC1Q9NTX5 DUX4L12-201ENST00000614593 1267 ntBASIC31.21■■■□□ 2.59
ECHDC1Q9NTX5 DUX4L14-201ENST00000621227 1267 ntBASIC31.21■■■□□ 2.59
ECHDC1Q9NTX5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ECHDC1Q9NTX5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ECHDC1Q9NTX5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ECHDC1Q9NTX5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
ECHDC1Q9NTX5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ECHDC1Q9NTX5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ECHDC1Q9NTX5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ECHDC1Q9NTX5 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.17■■■□□ 2.58
ECHDC1Q9NTX5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ECHDC1Q9NTX5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ECHDC1Q9NTX5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
ECHDC1Q9NTX5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ECHDC1Q9NTX5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms